TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | stop_gained | 3_prime_UTR_variant | splice_acceptor_variant&intron_variant | start_lost | stop_lost&splice_region_variant | synonymous_variant | initiator_codon_variant | missense_variant&splice_region_variant | intron_variant | splice_region_variant&synonymous_variant | upstream_gene_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&stop_retained_variant | missense_variant | 5_prime_UTR_variant | stop_retained_variant | splice_region_variant | downstream_gene_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS7A02G058800.1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 3 |
TraesCS6A02G181900.1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 23 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 3 |
TraesCS3A02G073700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 20 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 32 |
TraesCS3A02G092200.1 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 11 |
TraesCS5A02G161400.1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 85 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 12 |
TraesCS7A02G452500.1 | 0 | 0 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 21 | 0 | 0 | 0 | 25 |
TraesCS7A02G435300.1 | 0 | 1 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 27 | 0 | 0 | 0 | 9 | 1 | 0 | 0 | 0 |
TraesCS4A02G265100.1 | 0 | 2 | 0 | 0 | 0 | 22 | 0 | 0 | 8 | 0 | 14 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 1 |
TraesCS6A02G028300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1A02G302600.2 | 0 | 8 | 0 | 0 | 0 | 19 | 0 | 0 | 30 | 0 | 33 | 2 | 0 | 0 | 11 | 1 | 0 | 0 | 26 |
TraesCS6A02G322100.1 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 15 | 0 | 0 | 0 | 0 |
TraesCS3A02G477600.1 | 0 | 0 | 1 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 16 | 1 | 0 | 0 | 7 | 0 | 0 | 0 | 0 |
TraesCS5A02G024400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
TraesCS2A02G166900.1 | 0 | 0 | 0 | 0 | 0 | 13 | 0 | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 8 | 2 | 0 | 0 | 0 |
TraesCS3A02G490100.1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 1 | 0 | 12 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 68 |
B
Download the VCF file:
download
Id | 5_prime_UTR_variant | downstreamTraesCS3B02G481700.1 | splice_region_variant&intron_variant | stop_gained | upstream_geTraesCS3B02G094500.1 | downstream_gene_variant | splice_region_variant | upstream_gene_variant | missense_variant&splice_region_variant | intron_variant | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | missense_variant | synonymous_variant | start_lost | stop_lost | 5_prime_UTR_premature_start_codon_gain_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS3B02G046700.1 | 0 | 0 | 0 | 0 | 0 | 68 | 0 | 24 | 0 | 0 | 0 | 0 | 2 | 6 | 0 | 0 | 0 |
TraesCS2B02G193000.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 48 | 0 | 8 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
TraesCS5B02G229100.1 | 0 | 0 | 0 | 0 | 0 | 36 | 0 | 8 | 0 | 0 | 0 | 0 | 8 | 4 | 0 | 0 | 0 |
TraesCS7B02G045600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7B02G100000.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 28 | 0 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G429600.1 | 0 | 1 | 0 | 0 | 0 | 83 | 0 | 144 | 0 | 18 | 2 | 0 | 6 | 2 | 0 | 0 | 0 |
TraesCS6B02G384200.1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 28 | 0 | 30 | 0 | 0 | 102 | 80 | 0 | 0 | 0 |
TraesCS3B02G434200.1 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 |
TraesCS4B02G109600.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G248200.1 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 2 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G030000.1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 |
TraesCS3B02G376200.1 | 0 | 0 | 0 | 0 | 0 | 50 | 0 | 46 | 0 | 0 | 2 | 0 | 2 | 2 | 0 | 0 | 0 |
TraesCS4B02G008000.1 | 0 | 0 | 2 | 0 | 0 | 48 | 0 | 0 | 0 | 18 | 0 | 0 | 14 | 4 | 0 | 0 | 0 |
TraesCS7B02G377900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G155600.1 | 0 | 0 | 0 | 0 | 0 | 33 | 0 | 13 | 0 | 0 | 2 | 0 | 6 | 12 | 0 | 0 | 0 |