TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | stop_lost | missense_variant | missense_variant&splice_region_variant | stop_retained_variant | splice_region_variant&intron_variant | downstream_gene_variant | synonymous_variant | 5_prime_UTR_variant | upstream_gene_variant | splice_acceptor_variant&intron_variant | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_lost&splice_region_variant | stop_gained | splice_region_variant | intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS6A02G144200.1 | 0 | 7 | 0 | 0 | 0 | 5 | 5 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 |
| TraesCS5A02G033500.1 | 0 | 3 | 0 | 0 | 3 | 7 | 8 | 0 | 19 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G495200.1 | 0 | 2 | 0 | 0 | 0 | 28 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G487300.1 | 0 | 7 | 0 | 0 | 0 | 15 | 5 | 0 | 9 | 0 | 3 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS7A02G303700.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 43 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G039600.1 | 0 | 5 | 0 | 0 | 0 | 0 | 4 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G328700.1 | 0 | 1 | 0 | 0 | 0 | 3 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G120300.1 | 0 | 1 | 0 | 0 | 0 | 3 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G056500.1 | 0 | 8 | 0 | 0 | 0 | 0 | 4 | 1 | 80 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7A02G413500.1 | 0 | 0 | 0 | 0 | 0 | 15 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G005600.1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6A02G106200.1 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7A02G373700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 53 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G187100.1 | 0 | 6 | 0 | 0 | 1 | 65 | 4 | 0 | 5 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 21 |
| TraesCS5A02G270700.1 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 32 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 11 |
B
Download the VCF file:
download
| Id | splice_region_variant | 3_prime_UTR_variant | intron_variant | splice_region_variant&stop_retained_variant | downstream_gene_variant | 5_prime_UTR_variant | upstream_gene_variant | synonymous_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | missense_variant&splice_region_variant | stop_retained_variant | splice_region_variant&synonymous_variant | start_lost | stop_lost | stop_gained |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G539500.1 | 0 | 0 | 0 | 0 | 36 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G253300.1 | 0 | 2 | 0 | 0 | 22 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G251600.1 | 0 | 0 | 0 | 0 | 22 | 0 | 56 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G445100.1 | 0 | 0 | 0 | 0 | 4 | 0 | 12 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G220700.1 | 0 | 2 | 18 | 0 | 66 | 0 | 100 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G254100.1 | 0 | 4 | 2 | 0 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G217300.1 | 0 | 0 | 0 | 0 | 4 | 0 | 34 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G524600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G439700.1 | 0 | 2 | 0 | 0 | 28 | 0 | 36 | 14 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G328800.1 | 0 | 0 | 0 | 0 | 23 | 0 | 71 | 10 | 0 | 0 | 17 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G592400.1 | 0 | 14 | 94 | 0 | 24 | 0 | 20 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G031900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 38 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G299500.1 | 0 | 0 | 0 | 0 | 23 | 0 | 25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G231600.1 | 0 | 0 | 0 | 0 | 12 | 2 | 94 | 6 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G241800.1 | 0 | 0 | 0 | 0 | 10 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |