TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | stop_gained | 3_prime_UTR_variant | splice_acceptor_variant&intron_variant | start_lost | stop_lost&splice_region_variant | synonymous_variant | initiator_codon_variant | missense_variant&splice_region_variant | intron_variant | splice_region_variant&synonymous_variant | upstream_gene_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&stop_retained_variant | missense_variant | 5_prime_UTR_variant | stop_retained_variant | splice_region_variant | downstream_gene_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS7A02G203700.1 | 0 | 15 | 0 | 0 | 0 | 25 | 0 | 0 | 25 | 0 | 94 | 0 | 0 | 0 | 22 | 4 | 0 | 0 | 11 |
TraesCS6A02G125300.1 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 0 | 17 | 0 | 0 | 0 | 13 |
TraesCS7A02G367300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 |
TraesCS1A02G142500.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 22 | 0 | 21 | 2 | 0 | 0 | 2 | 1 | 0 | 0 | 13 |
TraesCS2A02G118300.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 35 | 2 | 0 | 0 | 7 | 0 | 0 | 0 | 4 |
TraesCS7A02G197500.1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 0 |
TraesCS6A02G156100.1 | 0 | 11 | 0 | 0 | 0 | 6 | 0 | 0 | 18 | 0 | 56 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 4 |
TraesCS4A02G127200.1 | 0 | 1 | 0 | 0 | 0 | 19 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 0 | 7 | 6 | 0 | 0 | 5 |
TraesCS1A02G240300.1 | 0 | 7 | 0 | 0 | 0 | 13 | 0 | 0 | 20 | 0 | 11 | 0 | 0 | 0 | 5 | 2 | 0 | 0 | 3 |
TraesCS5A02G418500.1 | 0 | 1 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 0 | 50 | 0 | 0 | 0 | 19 | 5 | 0 | 0 | 18 |
TraesCS5A02G491400.1 | 0 | 0 | 0 | 0 | 0 | 19 | 0 | 0 | 0 | 0 | 43 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 |
TraesCS6A02G289500.1 | 0 | 2 | 0 | 0 | 0 | 3 | 0 | 0 | 9 | 0 | 21 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
TraesCS1A02G012600.1 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 25 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 15 |
TraesCS4A02G344600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 |
TraesCS6A02G166200.1 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 3 | 0 | 16 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
download
Id | 5_prime_UTR_variant | downstreamTraesCS3B02G481700.1 | splice_region_variant&intron_variant | stop_gained | upstream_geTraesCS3B02G094500.1 | downstream_gene_variant | splice_region_variant | upstream_gene_variant | missense_variant&splice_region_variant | intron_variant | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | missense_variant | synonymous_variant | start_lost | stop_lost | 5_prime_UTR_premature_start_codon_gain_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS3B02G046700.1 | 0 | 0 | 0 | 0 | 0 | 68 | 0 | 24 | 0 | 0 | 0 | 0 | 2 | 6 | 0 | 0 | 0 |
TraesCS2B02G193000.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 48 | 0 | 8 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
TraesCS5B02G229100.1 | 0 | 0 | 0 | 0 | 0 | 36 | 0 | 8 | 0 | 0 | 0 | 0 | 8 | 4 | 0 | 0 | 0 |
TraesCS7B02G045600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7B02G100000.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 28 | 0 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G429600.1 | 0 | 1 | 0 | 0 | 0 | 83 | 0 | 144 | 0 | 18 | 2 | 0 | 6 | 2 | 0 | 0 | 0 |
TraesCS6B02G384200.1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 28 | 0 | 30 | 0 | 0 | 102 | 80 | 0 | 0 | 0 |
TraesCS3B02G434200.1 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 |
TraesCS4B02G109600.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G248200.1 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 2 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G030000.1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 |
TraesCS3B02G376200.1 | 0 | 0 | 0 | 0 | 0 | 50 | 0 | 46 | 0 | 0 | 2 | 0 | 2 | 2 | 0 | 0 | 0 |
TraesCS4B02G008000.1 | 0 | 0 | 2 | 0 | 0 | 48 | 0 | 0 | 0 | 18 | 0 | 0 | 14 | 4 | 0 | 0 | 0 |
TraesCS7B02G377900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G155600.1 | 0 | 0 | 0 | 0 | 0 | 33 | 0 | 13 | 0 | 0 | 2 | 0 | 6 | 12 | 0 | 0 | 0 |