TWGFD
The tetraploid wheat gene family database
A
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| Id | downstream_gene_variant | splice_region_variant&intron_variant | splice_region_variant&synonymous_variant | missense_variant | intron_variant | stop_gained | 5_prime_UTR_variant | missense_variant&splice_region_variant | synonymous_variant | splice_region_variant | upstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_retained_variant | splice_donor_variant&intron_variant | stop_lost&splice_region_variant | splice_acceptor_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1A02G366100.1 | 37 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 4 | 0 | 20 | 3 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G152700.1 | 25 | 0 | 0 | 1 | 6 | 0 | 0 | 0 | 4 | 0 | 29 | 3 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G094300.1 | 34 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 2 | 0 | 37 | 1 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G219400.1 | 13 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 95 | 4 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G365900.1 | 51 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 9 | 1 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G202500.1 | 25 | 0 | 0 | 6 | 19 | 0 | 0 | 0 | 1 | 0 | 29 | 1 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G552400.1 | 24 | 0 | 0 | 3 | 0 | 0 | 3 | 0 | 13 | 0 | 48 | 0 | 0 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
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| Id | splice_region_variant&synonymous_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | 5_prime_UTR_variant | intron_variant | 3_prime_UTR_variant | downstream_gene_variant | splice_region_variant&intron_variant | upstream_gene_variant | splice_donor_variant&intron_variant | stop_retained_variant | splice_region_variant | missense_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G290500.1 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 116 | 0 | 0 | 0 | 8 | 4 |
| TraesCS7B02G200700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 16 | 0 | 8 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G251400.1 | 0 | 0 | 0 | 0 | 10 | 0 | 6 | 0 | 18 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G109800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 46 | 0 | 14 | 0 | 0 | 0 | 2 | 2 |
| TraesCS7B02G036700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G589700.1 | 0 | 0 | 0 | 0 | 30 | 14 | 0 | 0 | 32 | 0 | 0 | 0 | 0 | 8 |
| TraesCS5B02G320800.1 | 0 | 0 | 0 | 4 | 16 | 24 | 26 | 0 | 94 | 0 | 2 | 0 | 8 | 14 |
| TraesCS3B02G423600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 56 | 0 | 0 | 0 | 0 | 2 |
| TraesCS1B02G279400.1 | 0 | 0 | 2 | 2 | 0 | 0 | 96 | 0 | 64 | 0 | 0 | 0 | 0 | 2 |
| TraesCS2B02G399200.1 | 0 | 0 | 0 | 0 | 2 | 0 | 32 | 0 | 24 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G124100.1 | 0 | 0 | 0 | 0 | 28 | 2 | 2 | 0 | 64 | 0 | 0 | 0 | 0 | 2 |
| TraesCS7B02G156100.1 | 0 | 0 | 0 | 0 | 8 | 2 | 34 | 0 | 6 | 0 | 0 | 0 | 6 | 0 |
| TraesCS5B02G157300.1 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 0 | 18 | 0 | 0 | 0 | 1 | 0 |
| TraesCS6B02G394700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 6 |
| TraesCS5B02G056600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |