TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | start_lost | upstream_gene_variant | splice_region_variant&synonymous_variant | stop_lost | missense_variant&splice_region_variant | stop_gained | downstream_gene_variant | splice_region_variant | 5_prime_UTR_variant | splice_region_variant&intron_variant | missense_variant | splice_donor_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | intron_variant | 3_prime_UTR_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS7A02G032400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 35 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G053900.1 | 0 | 40 | 0 | 0 | 0 | 1 | 39 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 |
| TraesCS6A02G213000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 49 | 0 | 0 | 0 | 5 | 0 | 0 | 5 | 1 | 3 |
| TraesCS1A02G156600.1 | 0 | 59 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 0 | 1 |
| TraesCS3A02G310500.1 | 0 | 12 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 5 |
| TraesCS1A02G302700.1 | 0 | 29 | 0 | 0 | 0 | 0 | 55 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 5 |
| TraesCS3A02G259900.1 | 0 | 33 | 0 | 0 | 0 | 0 | 44 | 1 | 1 | 0 | 6 | 0 | 0 | 0 | 10 | 5 |
| TraesCS2A02G547800.1 | 0 | 15 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 2 | 1 | 0 | 9 | 2 | 4 |
| TraesCS2A02G105600.1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 36 | 11 | 14 |
| TraesCS5A02G415500.1 | 0 | 13 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
| TraesCS3A02G462100.1 | 0 | 0 | 0 | 0 | 1 | 0 | 8 | 0 | 0 | 0 | 5 | 0 | 0 | 6 | 0 | 3 |
| TraesCS1A02G372100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 9 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 4 |
| TraesCS2A02G195700.1 | 0 | 23 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G417300.1 | 0 | 43 | 0 | 0 | 0 | 0 | 80 | 0 | 0 | 1 | 1 | 0 | 0 | 6 | 1 | 1 |
| TraesCS4A02G233900.1 | 0 | 56 | 0 | 0 | 0 | 0 | 49 | 1 | 1 | 0 | 6 | 0 | 0 | 7 | 0 | 1 |
B
Download the VCF file:
download
| Id | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | downstream_gene_variant | splice_region_variant&intron_variant | 3_prime_UTR_variant | missense_variant&splice_region_variant | upstream_gene_variant | intron_variant | synonymous_variant | missense_variant | 5_prime_UTR_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G073700.1 | 0 | 0 | 12 | 0 | 0 | 0 | 28 | 4 | 0 | 2 | 0 |
| TraesCS6B02G141300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| TraesCS7B02G406400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
| TraesCS3B02G501800.1 | 0 | 0 | 73 | 0 | 0 | 0 | 27 | 0 | 2 | 4 | 0 |
| TraesCS3B02G190100.1 | 0 | 0 | 20 | 0 | 0 | 0 | 14 | 2 | 0 | 0 | 0 |
| TraesCS6B02G353000.1 | 0 | 0 | 14 | 0 | 0 | 0 | 25 | 0 | 0 | 0 | 0 |
| TraesCS3B02G153600.1 | 0 | 0 | 36 | 0 | 0 | 0 | 18 | 0 | 0 | 0 | 0 |
| TraesCS5B02G116800.1 | 0 | 0 | 10 | 0 | 0 | 0 | 6 | 6 | 0 | 0 | 0 |
| TraesCS4B02G073100.1 | 2 | 0 | 50 | 0 | 0 | 0 | 26 | 4 | 4 | 2 | 0 |
| TraesCS1B02G427800.1 | 0 | 0 | 6 | 0 | 0 | 0 | 44 | 10 | 4 | 12 | 0 |
| TraesCS3B02G064900.1 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TraesCS2B02G482400.1 | 0 | 0 | 84 | 0 | 2 | 0 | 26 | 0 | 0 | 0 | 0 |
| TraesCS7B02G294500.1 | 2 | 0 | 6 | 0 | 2 | 0 | 38 | 2 | 0 | 2 | 0 |
| TraesCS3B02G438800.1 | 0 | 0 | 20 | 0 | 0 | 0 | 22 | 0 | 0 | 2 | 0 |
| TraesCS6B02G286900.1 | 0 | 0 | 21 | 0 | 0 | 0 | 17 | 0 | 0 | 1 | 0 |