TWGFD
The tetraploid wheat gene family database
A
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Id | synonymous_variant | intron_variant | missense_variant | splice_region_variant&synonymous_variant | splice_region_variant&intron_variant | splice_donor_variant&intron_variant | splice_region_variant | 5_prime_UTR_variant | upstream_gene_variant | missense_variant&splice_region_variant | downstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_lost&splice_region_variant | stop_gained |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS7A02G484300.1 | 14 | 0 | 5 | 2 | 1 | 0 | 0 | 1 | 43 | 0 | 0 | 1 | 0 | 0 | 1 |
TraesCS2A02G216500.1 | 1 | 8 | 1 | 0 | 0 | 0 | 0 | 2 | 34 | 0 | 8 | 0 | 0 | 0 | 0 |
TraesCS6A02G290500.1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 58 | 6 | 0 | 0 | 0 |
TraesCS5A02G255500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 47 | 0 | 26 | 0 | 0 | 0 | 0 |
TraesCS5A02G338800.1 | 2 | 16 | 0 | 0 | 2 | 1 | 0 | 0 | 37 | 0 | 39 | 2 | 0 | 0 | 0 |
TraesCS4A02G211600.1 | 5 | 0 | 3 | 0 | 2 | 0 | 0 | 1 | 10 | 0 | 1 | 1 | 0 | 0 | 0 |
TraesCS2A02G264600.1 | 4 | 18 | 4 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 11 | 2 | 0 | 0 | 0 |
TraesCS4A02G255400.1 | 1 | 0 | 3 | 0 | 0 | 0 | 1 | 2 | 30 | 0 | 29 | 0 | 0 | 0 | 0 |
TraesCS6A02G282900.1 | 5 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 29 | 0 | 3 | 1 | 0 | 0 | 0 |
TraesCS3A02G001500.1 | 13 | 17 | 3 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 13 | 9 | 0 | 0 | 0 |
TraesCS2A02G216600.1 | 3 | 5 | 8 | 1 | 0 | 0 | 0 | 1 | 45 | 0 | 8 | 2 | 0 | 0 | 0 |
TraesCS6A02G359600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS5A02G398200.1 | 9 | 18 | 9 | 0 | 0 | 0 | 0 | 2 | 30 | 0 | 30 | 1 | 0 | 0 | 0 |
TraesCS4A02G187000.1 | 2 | 0 | 5 | 0 | 0 | 0 | 0 | 1 | 48 | 0 | 21 | 3 | 0 | 0 | 0 |
TraesCS5A02G384200.1 | 8 | 4 | 2 | 0 | 0 | 0 | 0 | 7 | 66 | 0 | 31 | 10 | 2 | 0 | 0 |
B
Download the VCF file:
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Id | splice_region_variant&synonymous_variant | downstream_gene_variant | upstream_gene_variant | synonymous_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | intron_variant | stop_gained | splice_region_variant&intron_variant | splice_region_variant | start_lost | splice_acceptor_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | missense_variant&splice_region_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS5B02G393400.1 | 0 | 0 | 8 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 |
TraesCS7B02G290700.1 | 0 | 26 | 20 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G184900.1 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
TraesCS2B02G080800.1 | 0 | 18 | 4 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G386100.1 | 0 | 12 | 60 | 2 | 2 | 0 | 8 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 2 |
TraesCS4B02G059700.1 | 0 | 5 | 24 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
TraesCS7B02G110700.1 | 0 | 6 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G354200.1 | 0 | 42 | 4 | 8 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 |
TraesCS5B02G521500.1 | 0 | 12 | 44 | 12 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 2 | 0 | 12 | 0 |
TraesCS5B02G403300.1 | 0 | 0 | 16 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G273000.1 | 0 | 1 | 14 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G273200.1 | 0 | 11 | 19 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G301600.1 | 0 | 48 | 42 | 2 | 2 | 0 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G372400.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
TraesCS2B02G227000.1 | 0 | 36 | 24 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |