TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | missense_variant&splice_region_variant | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | stop_gained | upstream_gene_variant | 5_prime_UTR_variant | intron_variant | missense_variant | downstream_gene_variant | splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant | splice_region_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS7A02G048200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 0 | 0 | 0 | 0 |
| TraesCS1A02G228200.2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G150700.1 | 0 | 2 | 0 | 0 | 32 | 0 | 0 | 4 | 0 | 0 | 1 | 12 | 0 |
| TraesCS4A02G094300.1 | 0 | 5 | 0 | 0 | 24 | 0 | 0 | 0 | 83 | 0 | 0 | 2 | 0 |
| TraesCS6A02G202800.1 | 0 | 0 | 0 | 0 | 79 | 0 | 8 | 1 | 13 | 0 | 0 | 1 | 0 |
| TraesCS3A02G209200.1 | 0 | 0 | 0 | 0 | 54 | 2 | 3 | 1 | 31 | 0 | 0 | 4 | 0 |
| TraesCS4A02G038300.1 | 0 | 0 | 0 | 0 | 20 | 2 | 0 | 7 | 2 | 0 | 0 | 8 | 4 |
| TraesCS2A02G093700.1 | 0 | 2 | 0 | 0 | 28 | 1 | 0 | 2 | 1 | 0 | 0 | 11 | 2 |
| TraesCS1A02G441200.1 | 0 | 0 | 0 | 0 | 6 | 1 | 0 | 0 | 8 | 0 | 0 | 0 | 0 |
| TraesCS7A02G537000.1 | 0 | 3 | 0 | 0 | 0 | 1 | 10 | 0 | 0 | 0 | 0 | 13 | 0 |
| TraesCS5A02G181600.1 | 0 | 0 | 0 | 0 | 9 | 0 | 34 | 3 | 44 | 0 | 0 | 1 | 0 |
| TraesCS6A02G363900.1 | 0 | 3 | 0 | 0 | 21 | 1 | 21 | 1 | 6 | 0 | 0 | 1 | 0 |
| TraesCS7A02G241800.1 | 0 | 4 | 0 | 0 | 40 | 0 | 9 | 6 | 4 | 0 | 0 | 8 | 0 |
| TraesCS2A02G201900.1 | 0 | 7 | 0 | 0 | 3 | 6 | 15 | 0 | 46 | 0 | 0 | 5 | 0 |
| TraesCS4A02G363400.1 | 0 | 2 | 0 | 0 | 68 | 0 | 0 | 1 | 43 | 0 | 0 | 3 | 0 |
B
Download the VCF file:
download
| Id | 5_prime_UTR_variant | 3_prime_UTR_variant | upstream_gene_variant | missense_variant | upstream_gTraesCS5B02G358400.1 | synonymous_variant | upstream_gTraesCS5B02G101200.1 | intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_lost | downstream_gene_variant | splice_region_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1B02G242200.1 | 0 | 4 | 98 | 2 | 0 | 0 | 0 | 10 | 0 | 0 | 12 | 2 |
| TraesCS2B02G374900.1 | 0 | 0 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G267400.1 | 0 | 6 | 32 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 0 |
| TraesCS2B02G449200.1 | 6 | 6 | 18 | 0 | 0 | 2 | 0 | 6 | 0 | 0 | 90 | 0 |
| TraesCS5B02G362300.1 | 0 | 2 | 44 | 4 | 0 | 8 | 0 | 4 | 0 | 0 | 0 | 2 |
| TraesCS3B02G277900.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G381900.1 | 0 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 0 |
| TraesCS5B02G470500.1 | 0 | 0 | 2 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G149300.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 16 | 0 |
| TraesCS3B02G266200.1 | 0 | 2 | 22 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G375100.1 | 0 | 0 | 24 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
| TraesCS2B02G337800.1 | 0 | 0 | 30 | 2 | 0 | 2 | 0 | 6 | 0 | 0 | 10 | 0 |
| TraesCS4B02G254700.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G179300.1 | 0 | 0 | 88 | 2 | 1 | 0 | 1 | 28 | 0 | 0 | 126 | 0 |
| TraesCS3B02G170900.1 | 0 | 2 | 26 | 4 | 0 | 2 | 0 | 4 | 0 | 0 | 36 | 0 |