TWGFD
The tetraploid wheat gene family database
A
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Id | stop_gained | missense_variant | 3_prime_UTR_variant | upstream_gene_variant | synonymous_variant | 5_prime_UTR_variant | start_lost | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant |
---|---|---|---|---|---|---|---|---|---|---|
TraesCS5A02G342300.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G344600.1 | 0 | 0 | 0 | 12 | 0 | 1 | 0 | 0 | 0 | 0 |
TraesCS5A02G345900.1 | 0 | 0 | 0 | 28 | 0 | 0 | 1 | 0 | 0 | 0 |
TraesCS6A02G328700.1 | 0 | 0 | 12 | 46 | 1 | 0 | 0 | 24 | 0 | 0 |
TraesCS7A02G384600.1 | 0 | 0 | 4 | 91 | 0 | 1 | 0 | 57 | 0 | 0 |
TraesCS7A02G468500.1 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS4A02G297100.1 | 0 | 0 | 0 | 6 | 1 | 0 | 0 | 0 | 0 | 0 |
TraesCS4A02G296900.1 | 0 | 0 | 0 | 53 | 0 | 0 | 0 | 7 | 0 | 0 |
TraesCS7A02G418000.1 | 0 | 1 | 0 | 60 | 0 | 0 | 0 | 31 | 0 | 0 |
TraesCS7A02G418100.1 | 0 | 0 | 0 | 36 | 0 | 0 | 0 | 9 | 0 | 0 |
TraesCS5A02G345500.1 | 0 | 1 | 0 | 46 | 4 | 0 | 0 | 0 | 0 | 0 |
TraesCS6A02G329000.1 | 0 | 0 | 0 | 52 | 0 | 0 | 0 | 8 | 0 | 0 |
TraesCS3A02G415500.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2A02G494200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 32 | 0 | 0 |
TraesCS5A02G344700.1 | 0 | 0 | 3 | 14 | 1 | 3 | 0 | 0 | 2 | 0 |
B
Download the VCF file:
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Id | splice_region_variant&intron_variant | stop_lost&splice_region_variant | upstream_gene_variant | synonymous_variant | downstream_gene_variant | 5_prime_UTR_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | 3_prime_UTR_variant | missense_variant |
---|---|---|---|---|---|---|---|---|---|---|
TraesCS5B02G288200.1 | 0 | 0 | 6 | 0 | 3 | 0 | 0 | 0 | 0 | 2 |
TraesCS5B02G341400.1 | 0 | 0 | 56 | 5 | 0 | 2 | 0 | 1 | 3 | 7 |
TraesCS5B02G341800.1 | 0 | 0 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS2B02G523300.1 | 0 | 0 | 28 | 0 | 11 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G347100.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS5B02G342500.1 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS4B02G016800.1 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G359700.1 | 0 | 0 | 18 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343200.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 |
TraesCS5B02G346000.1 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343400.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G342900.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343000.1 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2B02G523200.1 | 0 | 0 | 10 | 0 | 16 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G346900.1 | 0 | 0 | 5 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |