TWGFD
The tetraploid wheat gene family database
A
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Id | splice_region_variant&synonymous_variant | intron_variant | splice_region_variant&intron_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | splice_donor_variant&intron_variant | splice_region_variant | stop_gained | upstream_gene_variant | 5_prime_UTR_variant | 3_prime_UTR_variant | synonymous_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS6A02G256700.1 | 0 | 0 | 0 | 0 | 0 | 48 | 0 | 0 | 0 | 29 | 0 | 0 | 0 |
TraesCS1A02G208100.1 | 0 | 11 | 0 | 9 | 0 | 28 | 0 | 0 | 0 | 84 | 0 | 1 | 6 |
TraesCS6A02G382800.1 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 23 | 0 | 0 | 0 |
TraesCS6A02G338300.1 | 0 | 0 | 0 | 6 | 0 | 21 | 0 | 0 | 0 | 2 | 4 | 0 | 6 |
TraesCS5A02G198800.1 | 0 | 0 | 0 | 5 | 0 | 26 | 0 | 0 | 0 | 6 | 0 | 0 | 1 |
TraesCS2A02G079300.1 | 0 | 0 | 0 | 19 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 23 |
TraesCS5A02G078400.1 | 0 | 25 | 0 | 1 | 0 | 75 | 0 | 0 | 0 | 101 | 0 | 3 | 9 |
TraesCS2A02G475600.1 | 0 | 0 | 0 | 1 | 2 | 35 | 0 | 0 | 0 | 17 | 4 | 0 | 5 |
TraesCS7A02G212000.1 | 0 | 8 | 1 | 9 | 0 | 4 | 0 | 0 | 0 | 28 | 5 | 1 | 35 |
TraesCS7A02G225500.1 | 0 | 0 | 0 | 3 | 0 | 36 | 0 | 0 | 0 | 28 | 0 | 2 | 8 |
TraesCS6A02G273100.1 | 0 | 45 | 1 | 1 | 0 | 53 | 0 | 0 | 0 | 2 | 2 | 1 | 7 |
TraesCS2A02G278300.1 | 0 | 17 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 31 | 0 | 0 | 2 |
TraesCS7A02G399900.1 | 0 | 0 | 0 | 1 | 0 | 78 | 0 | 0 | 0 | 38 | 0 | 0 | 3 |
TraesCS6A02G018500.1 | 0 | 6 | 1 | 13 | 0 | 0 | 0 | 0 | 0 | 17 | 0 | 0 | 16 |
TraesCS4A02G097700.1 | 0 | 40 | 1 | 3 | 0 | 22 | 0 | 0 | 0 | 1 | 0 | 3 | 12 |
B
Download the VCF file:
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Id | intron_variant | splice_region_variant&intron_variant | missense_variant&splice_region_variant | missense_variant | stop_gained | 3_prime_UTR_variant | 5_prime_UTR_variant | downstream_gene_variant | upstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant |
---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS4B02G236200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 6 | 0 | 0 |
TraesCS5B02G197400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 1 |
TraesCS6B02G469900.1 | 0 | 0 | 0 | 2 | 0 | 6 | 0 | 0 | 12 | 0 | 4 |
TraesCS7B02G219600.1 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 24 | 0 | 0 |
TraesCS3B02G591000.1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 6 | 0 | 2 |
TraesCS6B02G222200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 9 | 0 | 0 |
TraesCS4B02G098900.1 | 2 | 2 | 0 | 4 | 2 | 0 | 0 | 54 | 22 | 0 | 4 |
TraesCS5B02G087500.1 | 2 | 0 | 0 | 2 | 0 | 2 | 0 | 2 | 4 | 0 | 0 |
TraesCS2B02G478300.1 | 8 | 0 | 0 | 2 | 0 | 0 | 0 | 30 | 68 | 0 | 4 |
TraesCS6B02G213500.2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 14 | 14 | 0 | 2 |
TraesCS5B02G200100.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 0 | 0 |
TraesCS1B02G222200.1 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 8 | 18 | 0 | 0 |
TraesCS7B02G378900.1 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 31 | 0 | 1 |
TraesCS7B02G194100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 11 | 4 | 0 | 0 |
TraesCS2B02G094100.1 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 8 | 0 | 2 |