TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | stop_lost&splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant | 5_prime_UTR_variant | intron_variant | upstream_gene_variant | start_lost | splice_region_variant&intron_variant | 3_prime_UTR_variant | splice_region_variant | missense_variant | downstream_gene_variant | splice_acceptor_variant&intron_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS4A02G176200.1 | 0 | 0 | 5 | 21 | 43 | 0 | 1 | 5 | 0 | 2 | 0 | 1 | 5 |
| TraesCS5A02G135000.1 | 0 | 0 | 1 | 0 | 44 | 0 | 0 | 0 | 0 | 0 | 38 | 0 | 2 |
| TraesCS3A02G360300.1 | 0 | 0 | 0 | 0 | 37 | 0 | 0 | 0 | 0 | 4 | 61 | 0 | 13 |
| TraesCS5A02G481300.1 | 0 | 0 | 0 | 0 | 32 | 0 | 0 | 2 | 0 | 0 | 13 | 0 | 5 |
| TraesCS3A02G392600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 0 | 0 |
| TraesCS1A02G319700.1 | 0 | 0 | 4 | 0 | 45 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4A02G185900.1 | 0 | 0 | 0 | 0 | 26 | 0 | 0 | 1 | 0 | 1 | 3 | 0 | 2 |
| TraesCS1A02G304000.1 | 0 | 0 | 0 | 0 | 61 | 0 | 0 | 0 | 0 | 8 | 50 | 0 | 10 |
| TraesCS4A02G176500.1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 5 |
| TraesCS2A02G096800.1 | 0 | 0 | 0 | 0 | 52 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 |
| TraesCS3A02G068000.1 | 0 | 0 | 0 | 0 | 28 | 0 | 0 | 0 | 0 | 17 | 26 | 0 | 6 |
| TraesCS5A02G144000.1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 3 | 72 | 0 | 6 |
| TraesCS1A02G030300.1 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 2 | 8 | 0 | 5 |
| TraesCS4A02G191300.1 | 0 | 0 | 0 | 4 | 20 | 0 | 0 | 0 | 0 | 1 | 18 | 0 | 3 |
| TraesCS4A02G088500.1 | 0 | 0 | 0 | 0 | 40 | 0 | 0 | 1 | 0 | 0 | 64 | 0 | 0 |
B
Download the VCF file:
download
| Id | downstream_gene_variant | splice_region_variant&intron_variant | upstream_gene_variant | missense_variant | intron_variant | synonymous_variant | downstream_gene_variaTraesCS3B02G385800.1 | 5_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | 3_prime_UTR_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS4B02G266700.1 | 14 | 0 | 6 | 3 | 4 | 0 | 0 | 1 | 1 | 0 |
| TraesCS5B02G143100.1 | 10 | 0 | 16 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G141400.1 | 12 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G043100.1 | 29 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| TraesCS4B02G141200.1 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G081100.1 | 26 | 0 | 4 | 4 | 0 | 3 | 0 | 0 | 0 | 0 |
| TraesCS5B02G133800.1 | 22 | 0 | 12 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G077800.1 | 0 | 0 | 6 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| TraesCS1B02G314500.1 | 30 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G332000.1 | 18 | 0 | 36 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| TraesCS2B02G214600.1 | 19 | 0 | 20 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G535100.1 | 34 | 0 | 13 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TraesCS4B02G133000.1 | 11 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G367300.1 | 2 | 0 | 36 | 0 | 0 | 2 | 0 | 0 | 0 | 5 |
| TraesCS3B02G392600.1 | 3 | 0 | 17 | 1 | 0 | 1 | 0 | 0 | 0 | 1 |