TWGFD
The tetraploid wheat gene family database
A
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| Id | 5_prime_UTR_variant | splice_region_variant&intron_variant | 3_prime_UTR_variant | intron_variant | upstream_gene_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | downstream_gene_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3A02G244100.1 | 5 | 1 | 5 | 32 | 30 | 15 | 1 | 0 | 40 | 11 |
| TraesCS3A02G538100.1 | 0 | 0 | 0 | 1 | 7 | 6 | 0 | 0 | 0 | 3 |
| TraesCS1A02G064100.1 | 3 | 0 | 2 | 6 | 38 | 0 | 1 | 0 | 19 | 3 |
| TraesCS1A02G357500.3 | 0 | 1 | 2 | 46 | 14 | 9 | 0 | 0 | 39 | 9 |
| TraesCS3A02G108100.1 | 0 | 1 | 6 | 1 | 12 | 0 | 0 | 0 | 19 | 4 |
| TraesCS5A02G502100.1 | 0 | 0 | 5 | 0 | 26 | 7 | 0 | 0 | 23 | 4 |
| TraesCS5A02G055100.1 | 0 | 0 | 7 | 0 | 22 | 4 | 0 | 0 | 11 | 0 |
| TraesCS5A02G377500.1 | 1 | 0 | 0 | 0 | 65 | 2 | 0 | 0 | 0 | 3 |
| TraesCS2A02G470100.1 | 5 | 0 | 18 | 0 | 49 | 1 | 1 | 0 | 0 | 4 |
B
Download the VCF file:
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| Id | intron_variant | missense_variant | downstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | synonymous_variant | upstream_gene_variant | splice_region_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G381100.1 | 0 | 0 | 52 | 0 | 0 | 0 | 40 | 0 |
| TraesCS3B02G431200.1 | 10 | 6 | 122 | 0 | 2 | 2 | 26 | 0 |
| TraesCS7B02G244900.1 | 2 | 0 | 56 | 2 | 0 | 0 | 2 | 0 |
| TraesCS2B02G418900.1 | 0 | 0 | 68 | 0 | 0 | 0 | 94 | 0 |
| TraesCS1B02G142100.1 | 0 | 0 | 28 | 0 | 0 | 0 | 14 | 0 |
| TraesCS2B02G247100.1 | 2 | 0 | 22 | 0 | 0 | 4 | 18 | 0 |
| TraesCS1B02G297500.1 | 0 | 12 | 0 | 4 | 0 | 14 | 2 | 0 |
| TraesCS2B02G188800.1 | 16 | 2 | 90 | 2 | 0 | 2 | 24 | 0 |
| TraesCS3B02G469100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
| TraesCS5B02G375000.1 | 2 | 0 | 18 | 2 | 0 | 0 | 32 | 0 |
| TraesCS5B02G160400.1 | 0 | 0 | 2 | 0 | 0 | 0 | 6 | 0 |
| TraesCS5B02G566200.1 | 2 | 0 | 0 | 0 | 0 | 2 | 142 | 2 |
| TraesCS3B02G124000.1 | 0 | 4 | 44 | 2 | 0 | 2 | 18 | 0 |
| TraesCS2B02G492900.1 | 16 | 8 | 0 | 0 | 0 | 10 | 50 | 0 |
| TraesCS5B02G427800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 38 | 0 |