TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | 5_prime_UTR_variant | missense_variant&splice_region_variant | synonymous_variant | splice_region_variant&intron_variant | splice_donor_variant&intron_variant | missense_variant | intron_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant | splice_acceptor_variant&intron_variant | downstream_gene_variant | stop_gained | stop_lost&splice_region_variant | upstream_gene_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS3A02G008100.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS4A02G175700.1 | 0 | 0 | 5 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 28 |
TraesCS5A02G410900.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 30 |
TraesCS5A02G029300.1 | 1 | 0 | 5 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 43 |
TraesCS5A02G230700.1 | 8 | 1 | 4 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 33 |
TraesCS3A02G044600.1 | 5 | 0 | 12 | 1 | 0 | 16 | 15 | 7 | 1 | 1 | 0 | 19 | 1 | 0 | 5 |
TraesCS7A02G472100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS2A02G008300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 3 |
TraesCS1A02G323600.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
TraesCS6A02G230400.1 | 0 | 0 | 3 | 0 | 0 | 7 | 2 | 0 | 0 | 0 | 0 | 82 | 0 | 0 | 2 |
TraesCS3A02G325600.1 | 3 | 0 | 9 | 1 | 0 | 6 | 0 | 0 | 1 | 0 | 0 | 17 | 0 | 0 | 115 |
TraesCS4A02G312800.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
TraesCS2A02G197500.1 | 0 | 0 | 22 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 22 | 0 | 0 | 29 |
TraesCS7A02G125700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 |
TraesCS5A02G087400.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 13 |
B
Download the VCF file:
download
Id | stop_lost&splice_region_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant | splice_donor_variant&intron_variant | intron_variant | upstream_gene_variant | splice_region_variant&intron_variant | stop_lost | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | splice_region_variant&synonymous_variant | synonymou1 | synonymousTraesCS3B02G265500.1 | splice_acceptor_variant&intron_variant | 3_prime_UTR_variant | synonymous_variant | stop_gained | synonymousTraesCS3B02G323800.1 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS1B02G416200.1 | 0 | 6 | 0 | 0 | 0 | 6 | 0 | 0 | 8 | 2 | 16 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 |
TraesCS5B02G326100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G116600.1 | 2 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G344000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 44 | 0 | 0 |
TraesCS6B02G133300.1 | 0 | 2 | 0 | 0 | 2 | 87 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
TraesCS1B02G017600.1 | 0 | 0 | 0 | 0 | 2 | 8 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G403400.2 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2B02G523900.1 | 0 | 0 | 0 | 0 | 0 | 44 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 |
TraesCS5B02G179100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G384300.1 | 0 | 6 | 0 | 0 | 0 | 26 | 0 | 0 | 2 | 0 | 62 | 0 | 0 | 0 | 0 | 8 | 6 | 0 | 0 |
TraesCS1B02G393000.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G020400.1 | 0 | 0 | 0 | 0 | 4 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G169700.1 | 2 | 0 | 0 | 0 | 0 | 42 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 |
TraesCS2B02G206900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
TraesCS7B02G351100.1 | 0 | 0 | 0 | 0 | 6 | 32 | 0 | 0 | 0 | 0 | 86 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |