TWGFD
The tetraploid wheat gene family database
A
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| Id | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | stop_retained_variant | synonymous_variant | 3_prime_UTR_variant | splice_region_variant&intron_variant | upstream_gene_variant | downstream_gene_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant | splice_region_variant&synonymous_variant | splice_donor_variant&intron_variant | missense_variant | intron_variant | start_lost | splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1A02G257400.1 | 0 | 0 | 0 | 5 | 1 | 0 | 3 | 36 | 1 | 0 | 0 | 0 | 3 | 10 | 0 | 0 |
| TraesCS2A02G205500.1 | 0 | 2 | 0 | 1 | 1 | 0 | 23 | 12 | 4 | 0 | 0 | 0 | 0 | 6 | 0 | 0 |
| TraesCS4A02G359900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 67 | 29 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| TraesCS7A02G070000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G472400.1 | 0 | 0 | 0 | 3 | 0 | 0 | 59 | 32 | 4 | 0 | 0 | 0 | 1 | 8 | 0 | 0 |
| TraesCS2A02G488600.1 | 0 | 0 | 0 | 14 | 6 | 0 | 13 | 43 | 0 | 0 | 0 | 0 | 13 | 2 | 0 | 0 |
| TraesCS2A02G314600.1 | 0 | 0 | 0 | 5 | 2 | 1 | 36 | 0 | 1 | 1 | 0 | 0 | 3 | 34 | 0 | 0 |
| TraesCS2A02G385500.1 | 0 | 0 | 0 | 8 | 0 | 0 | 12 | 3 | 3 | 0 | 0 | 0 | 4 | 13 | 0 | 0 |
| TraesCS5A02G435600.2 | 0 | 0 | 0 | 12 | 6 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 13 | 15 | 0 | 0 |
| TraesCS5A02G357300.1 | 0 | 0 | 0 | 5 | 0 | 1 | 27 | 20 | 0 | 0 | 0 | 0 | 5 | 0 | 1 | 0 |
| TraesCS7A02G430500.1 | 0 | 0 | 0 | 7 | 0 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 |
| TraesCS5A02G189500.1 | 0 | 0 | 0 | 17 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 |
| TraesCS6A02G420400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| TraesCS6A02G252300.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G509400.1 | 0 | 0 | 0 | 8 | 0 | 2 | 50 | 16 | 0 | 0 | 0 | 0 | 2 | 46 | 0 | 0 |
B
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| Id | 5_prime_UTR_variant | 3_prime_UTR_variant | synonymous_variant | splice_region_variant&intron_variant | splice_region_variant | intron_variant | downstream_gene_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | upstream_gene_variant | upstreaTraesCS3B02G461300.1 | stop_gained |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G443900.1 | 6 | 0 | 8 | 2 | 0 | 2 | 40 | 12 | 0 | 0 | 160 | 0 | 0 |
| TraesCS1B02G435900.1 | 0 | 0 | 28 | 4 | 0 | 42 | 0 | 2 | 0 | 4 | 0 | 0 | 0 |
| TraesCS3B02G213700.1 | 0 | 4 | 8 | 0 | 0 | 72 | 94 | 6 | 0 | 0 | 23 | 1 | 0 |
| TraesCS1B02G353800.1 | 4 | 2 | 2 | 0 | 0 | 0 | 26 | 2 | 0 | 0 | 32 | 0 | 0 |
| TraesCS5B02G180800.1 | 0 | 2 | 0 | 0 | 0 | 2 | 30 | 0 | 0 | 0 | 56 | 0 | 0 |
| TraesCS2B02G059100.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G197100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 20 | 0 | 0 |
| TraesCS5B02G359800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS6B02G046600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| TraesCS1B02G198500.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 36 | 0 | 0 |
| TraesCS4B02G262800.1 | 0 | 10 | 2 | 0 | 0 | 0 | 50 | 2 | 0 | 0 | 38 | 0 | 0 |
| TraesCS6B02G045600.1 | 0 | 0 | 3 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 4 | 0 | 0 |
| TraesCS6B02G135300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 0 | 0 |
| TraesCS4B02G243500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G430000.1 | 2 | 0 | 2 | 2 | 0 | 46 | 68 | 2 | 0 | 2 | 6 | 0 | 0 |