TWGFD
The tetraploid wheat gene family database
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Phytocyanins>>Nucleotide variation
A
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| Id | 5_prime_UTR_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_donor_variant&intron_variant | synonymous_variant | missense_variant | downstream_gene_variant | intron_variant | 3_prime_UTR_variant | upstream_gene_variant | splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G428500.1 | 0 | 0 | 0 | 0 | 0 | 2 | 44 | 1 | 5 | 58 | 0 |
| TraesCS5A02G556100.1 | 0 | 0 | 0 | 0 | 0 | 1 | 61 | 0 | 0 | 4 | 0 |
| TraesCS3A02G273200.1 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 |
| TraesCS7A02G307900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 0 |
| TraesCS1A02G410100.1 | 0 | 0 | 0 | 0 | 2 | 0 | 25 | 0 | 0 | 14 | 0 |
| TraesCS4A02G033500.1 | 0 | 0 | 0 | 0 | 3 | 4 | 17 | 0 | 4 | 50 | 0 |
| TraesCS4A02G269500.1 | 0 | 0 | 0 | 0 | 1 | 1 | 22 | 0 | 0 | 4 | 0 |
| TraesCS1A02G348000.1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS5A02G430200.1 | 0 | 0 | 0 | 0 | 1 | 0 | 38 | 0 | 0 | 1 | 0 |
| TraesCS5A02G430600.1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 12 | 0 |
| TraesCS2A02G541800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 2 | 0 |
| TraesCS2A02G551300.1 | 1 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 9 | 0 |
| TraesCS3A02G457500.1 | 0 | 0 | 0 | 0 | 1 | 1 | 36 | 0 | 0 | 20 | 0 |
| TraesCS7A02G176800.1 | 0 | 0 | 0 | 0 | 4 | 1 | 45 | 0 | 2 | 6 | 0 |
| TraesCS3A02G324700.1 | 0 | 0 | 0 | 0 | 6 | 4 | 0 | 0 | 2 | 10 | 0 |
B
Download the VCF file:
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| Id | 3_prime_UTR_variant | downstream_gene_variant | intron_variant | missense_variant | 5_prime_UTR_variant | upstream_gene_variant | splice_region_variant&synonymous_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|
| TraesCS6B02G346200.1 | 0 | 86 | 0 | 2 | 0 | 18 | 0 | 0 |
| TraesCS5B02G430500.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G354800.1 | 0 | 12 | 0 | 0 | 0 | 104 | 0 | 2 |
| TraesCS6B02G313200.1 | 2 | 34 | 4 | 2 | 0 | 78 | 0 | 0 |
| TraesCS6B02G282000.1 | 2 | 38 | 0 | 0 | 0 | 84 | 0 | 4 |
| TraesCS2B02G225400.1 | 2 | 56 | 26 | 2 | 0 | 62 | 0 | 0 |
| TraesCS1B02G324700.1 | 0 | 30 | 0 | 0 | 0 | 28 | 0 | 4 |
| TraesCS1B02G328500.1 | 0 | 0 | 62 | 0 | 0 | 2 | 0 | 0 |
| TraesCS5B02G473300.1 | 0 | 32 | 2 | 2 | 2 | 102 | 0 | 2 |
| TraesCS5B02G432300.1 | 0 | 0 | 0 | 0 | 0 | 62 | 0 | 0 |
| TraesCS2B02G052800.1 | 0 | 46 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G165500.1 | 2 | 6 | 0 | 0 | 0 | 4 | 0 | 0 |
| TraesCS7B02G122200.1 | 0 | 6 | 0 | 2 | 0 | 32 | 0 | 0 |
| TraesCS5B02G432200.1 | 0 | 26 | 0 | 2 | 0 | 28 | 0 | 0 |
| TraesCS5B02G246200.1 | 0 | 42 | 0 | 0 | 0 | 94 | 0 | 0 |