TWGFD
The tetraploid wheat gene family database
A
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Id | stop_gained | missense_variant | 3_prime_UTR_variant | upstream_gene_variant | synonymous_variant | 5_prime_UTR_variant | start_lost | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant |
---|---|---|---|---|---|---|---|---|---|---|
TraesCS2A02G430400.1 | 0 | 0 | 3 | 61 | 1 | 0 | 0 | 42 | 0 | 0 |
TraesCS6A02G115700.1 | 0 | 3 | 0 | 50 | 2 | 0 | 0 | 40 | 0 | 0 |
TraesCS2A02G494900.1 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 28 | 0 | 0 |
TraesCS7A02G469200.1 | 0 | 0 | 1 | 62 | 0 | 0 | 0 | 20 | 0 | 0 |
TraesCS5A02G288900.1 | 0 | 0 | 0 | 37 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7A02G468200.1 | 1 | 3 | 0 | 1 | 1 | 0 | 0 | 37 | 0 | 0 |
TraesCS2A02G494400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 69 | 0 | 0 |
TraesCS5A02G288800.1 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G343200.1 | 0 | 2 | 0 | 57 | 2 | 0 | 0 | 0 | 0 | 0 |
TraesCS7A02G469000.1 | 0 | 2 | 0 | 5 | 1 | 2 | 0 | 25 | 0 | 0 |
TraesCS5A02G341900.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G345600.1 | 0 | 7 | 2 | 18 | 7 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G345400.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G342500.1 | 0 | 0 | 0 | 20 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G343400.1 | 0 | 9 | 4 | 0 | 8 | 2 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
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Id | splice_region_variant&intron_variant | stop_lost&splice_region_variant | upstream_gene_variant | synonymous_variant | downstream_gene_variant | 5_prime_UTR_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | 3_prime_UTR_variant | missense_variant |
---|---|---|---|---|---|---|---|---|---|---|
TraesCS5B02G288200.1 | 0 | 0 | 6 | 0 | 3 | 0 | 0 | 0 | 0 | 2 |
TraesCS5B02G341400.1 | 0 | 0 | 56 | 5 | 0 | 2 | 0 | 1 | 3 | 7 |
TraesCS5B02G341800.1 | 0 | 0 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS2B02G523300.1 | 0 | 0 | 28 | 0 | 11 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G347100.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
TraesCS5B02G342500.1 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS4B02G016800.1 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G359700.1 | 0 | 0 | 18 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343200.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 |
TraesCS5B02G346000.1 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343400.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G342900.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G343000.1 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2B02G523200.1 | 0 | 0 | 10 | 0 | 16 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G346900.1 | 0 | 0 | 5 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |