TWGFD
The tetraploid wheat gene family database
A
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| Id | downstream_gene_variant | missense_variant | missense_variant&splice_region_variant | splice_region_variant&intron_variant | 3_prime_UTR_variant | upstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant | 5_prime_UTR_variant | intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1A02G050400.1 | 3 | 0 | 0 | 0 | 3 | 57 | 0 | 3 | 0 | 1 |
| TraesCS3A02G107100.1 | 0 | 4 | 1 | 0 | 0 | 23 | 0 | 2 | 0 | 1 |
| TraesCS7A02G261100.1 | 39 | 0 | 0 | 0 | 7 | 47 | 0 | 0 | 0 | 0 |
| TraesCS7A02G533900.1 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| TraesCS6A02G382400.1 | 64 | 5 | 0 | 0 | 1 | 20 | 0 | 1 | 0 | 5 |
| TraesCS3A02G255300.1 | 32 | 1 | 0 | 0 | 0 | 35 | 0 | 1 | 1 | 0 |
B
Download the VCF file:
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| Id | splice_region_variant&synonymous_variant | missense_variant | upstream_gene_variant | synonymous_variant | 5_prime_UTR_variant | 3_prime_UTR_variant | splice_region_variant&intron_variant | intron_variant | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1B02G066900.1 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 4 | 0 | 0 |
| TraesCS6B02G421500.1 | 0 | 0 | 13 | 0 | 2 | 0 | 0 | 7 | 17 | 0 |
| TraesCS6B02G176800.1 | 0 | 0 | 22 | 0 | 0 | 0 | 0 | 1 | 16 | 0 |
| TraesCS1B02G147200.1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 6 | 0 |
| TraesCS2B02G055700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 0 |
| TraesCS7B02G050500.1 | 0 | 0 | 9 | 1 | 0 | 1 | 0 | 3 | 27 | 0 |
| TraesCS3B02G441800.1 | 0 | 5 | 42 | 1 | 0 | 0 | 0 | 6 | 2 | 0 |
| TraesCS7B02G451200.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 | 9 | 0 |
| TraesCS5B02G040700.1 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS3B02G287200.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 21 | 0 |
| TraesCS2B02G056100.1 | 0 | 2 | 7 | 0 | 0 | 2 | 0 | 0 | 5 | 0 |
| TraesCS5B02G288600.1 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 7 | 0 |
| TraesCS6B02G015100.1 | 1 | 6 | 144 | 13 | 3 | 0 | 3 | 40 | 0 | 1 |
| TraesCS7B02G064300.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G248300.1 | 0 | 0 | 30 | 0 | 0 | 2 | 1 | 2 | 57 | 1 |