TWGFD
The tetraploid wheat gene family database
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| Id | stop_retained_variant | intron_variant | synonymous_variant | splice_region_variant&synonymous_variant | splice_acceptor_variant&intron_variant | splice_region_variant&intron_variant | upstream_gene_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant&splice_region_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3A02G231600.1 | 0 | 13 | 1 | 0 | 0 | 0 | 63 | 1 | 0 | 0 | 0 | 0 | 19 |
| TraesCS2A02G267400.1 | 0 | 14 | 0 | 0 | 0 | 0 | 66 | 1 | 0 | 0 | 2 | 0 | 42 |
| TraesCS5A02G085000.1 | 0 | 3 | 1 | 0 | 0 | 0 | 7 | 3 | 0 | 0 | 1 | 0 | 19 |
| TraesCS3A02G247200.1 | 0 | 12 | 2 | 0 | 0 | 0 | 34 | 0 | 0 | 0 | 0 | 1 | 54 |
| TraesCS7A02G083900.1 | 0 | 5 | 1 | 0 | 0 | 0 | 72 | 11 | 0 | 0 | 0 | 0 | 27 |
| TraesCS2A02G100700.1 | 0 | 0 | 2 | 0 | 0 | 0 | 87 | 0 | 0 | 0 | 2 | 0 | 71 |
| TraesCS3A02G363900.1 | 0 | 20 | 11 | 0 | 0 | 0 | 52 | 5 | 0 | 0 | 3 | 2 | 40 |
| TraesCS7A02G308400.1 | 0 | 12 | 4 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 3 | 1 | 30 |
| TraesCS3A02G454600.1 | 0 | 47 | 19 | 0 | 0 | 0 | 0 | 13 | 0 | 0 | 8 | 0 | 40 |
| TraesCS6A02G120600.1 | 0 | 0 | 4 | 0 | 0 | 0 | 52 | 3 | 0 | 0 | 0 | 0 | 28 |
| TraesCS5A02G316800.1 | 0 | 0 | 1 | 0 | 0 | 0 | 14 | 0 | 0 | 0 | 5 | 0 | 89 |
| TraesCS6A02G145500.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 |
| TraesCS1A02G399400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G358100.1 | 0 | 11 | 2 | 0 | 0 | 0 | 44 | 2 | 0 | 0 | 1 | 1 | 35 |
| TraesCS3A02G305300.1 | 0 | 19 | 17 | 0 | 0 | 2 | 16 | 11 | 0 | 0 | 0 | 0 | 0 |
B
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| Id | 3_prime_UTR_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant | downstream_gene_variant | intron_variant | stop_retained_variant | upstream_gene_variant | missense_variant | missense_variant&splice_region_variant | splice_region_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G273900.1 | 0 | 0 | 0 | 0 | 2 | 12 | 4 | 0 | 18 | 8 | 0 | 0 | 2 |
| TraesCS3B02G399800.1 | 0 | 0 | 0 | 0 | 0 | 34 | 0 | 0 | 20 | 0 | 0 | 0 | 0 |
| TraesCS2B02G542600.1 | 8 | 0 | 0 | 0 | 4 | 0 | 8 | 0 | 231 | 10 | 0 | 0 | 14 |
| TraesCS1B02G135600.1 | 0 | 0 | 0 | 0 | 0 | 30 | 0 | 0 | 62 | 0 | 0 | 0 | 0 |
| TraesCS2B02G497500.1 | 0 | 0 | 0 | 0 | 2 | 6 | 2 | 0 | 24 | 0 | 0 | 2 | 16 |
| TraesCS2B02G434900.1 | 0 | 0 | 0 | 0 | 0 | 32 | 2 | 0 | 10 | 2 | 0 | 0 | 0 |
| TraesCS6B02G148700.1 | 0 | 0 | 0 | 0 | 0 | 52 | 0 | 0 | 24 | 0 | 0 | 0 | 0 |
| TraesCS1B02G290200.1 | 2 | 0 | 0 | 0 | 0 | 38 | 4 | 0 | 44 | 2 | 0 | 0 | 4 |
| TraesCS3B02G138400.1 | 18 | 2 | 0 | 0 | 0 | 150 | 10 | 2 | 245 | 26 | 0 | 0 | 4 |
| TraesCS3B02G087800.1 | 4 | 0 | 0 | 0 | 0 | 24 | 4 | 0 | 12 | 0 | 0 | 0 | 0 |
| TraesCS3B02G493200.1 | 2 | 0 | 0 | 6 | 0 | 6 | 22 | 0 | 0 | 16 | 0 | 0 | 6 |
| TraesCS3B02G391100.1 | 0 | 0 | 0 | 2 | 0 | 70 | 8 | 0 | 34 | 4 | 0 | 0 | 4 |
| TraesCS4B02G287600.1 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 0 | 10 | 0 | 0 | 0 | 0 |
| TraesCS4B02G114600.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 2 | 0 | 0 | 0 |
| TraesCS4B02G063100.1 | 0 | 0 | 0 | 0 | 0 | 18 | 32 | 0 | 14 | 2 | 0 | 0 | 2 |