TWGFD
The tetraploid wheat gene family database
A
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| Id | intron_variant | splice_region_variant | splice_region_variant&intron_variant | downstream_gene_variant | upstream_gene_variant | synonymous_variant | splice_region_variant&synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | 3_prime_UTR_variant | stop_lost | missense_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G071000.1 | 0 | 0 | 0 | 16 | 24 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 0 |
| TraesCS5A02G113400.1 | 0 | 0 | 1 | 0 | 37 | 3 | 0 | 0 | 4 | 0 | 1 | 0 | 0 |
| TraesCS7A02G395300.1 | 60 | 0 | 0 | 49 | 9 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
| TraesCS7A02G537200.1 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 3 | 0 | 0 |
| TraesCS7A02G185700.1 | 0 | 0 | 0 | 1 | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G195800.1 | 21 | 0 | 0 | 7 | 33 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
| TraesCS3A02G241100.1 | 34 | 0 | 1 | 7 | 37 | 4 | 0 | 0 | 2 | 0 | 2 | 1 | 0 |
| TraesCS3A02G098400.1 | 0 | 0 | 0 | 6 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G387400.1 | 10 | 0 | 0 | 12 | 12 | 5 | 0 | 0 | 0 | 0 | 2 | 1 | 0 |
| TraesCS1A02G082000.1 | 0 | 0 | 5 | 11 | 1 | 10 | 1 | 0 | 0 | 0 | 2 | 6 | 0 |
B
Download the VCF file:
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| Id | splice_region_variant&intron_variant | upstream_gene_variant | synonymous_variant | missense_variant | intron_variant | 5_prime_UTR_variant | splice_region_variant | 3_prime_UTR_variant | stop_lost&splice_region_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G233400.1 | 0 | 31 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 25 |
| TraesCS3B02G244800.1 | 0 | 33 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 27 |
| TraesCS7B02G128000.1 | 0 | 10 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| TraesCS7B02G437500.1 | 0 | 0 | 5 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G139900.1 | 0 | 10 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G073700.1 | 0 | 25 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 12 |
| TraesCS3B02G607000.1 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G243400.1 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
| TraesCS1B02G414800.1 | 0 | 4 | 2 | 1 | 3 | 0 | 0 | 0 | 0 | 7 |
| TraesCS7B02G444800.1 | 0 | 56 | 8 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G208700.1 | 0 | 18 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 29 |
| TraesCS2B02G079700.1 | 0 | 9 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS6B02G370400.1 | 0 | 22 | 4 | 3 | 0 | 0 | 0 | 7 | 0 | 30 |
| TraesCS2B02G603500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 26 |
| TraesCS6B02G312000.2 | 0 | 5 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |