TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | stop_gained | splice_region_variant | intron_variant | stop_lost&splice_region_variant | upstream_gene_variant | synonymous_variant | splice_region_variant&intron_variant | downstream_gene_variant | 5_prime_UTR_variant | splice_region_variant&synonymous_variant | 3_prime_UTR_variant | missense_variant | missense_variant&splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS3A02G297300.1 | 0 | 0 | 0 | 0 | 10 | 3 | 0 | 2 | 0 | 0 | 1 | 10 | 0 | 0 |
TraesCS7A02G339700.1 | 0 | 0 | 0 | 0 | 46 | 6 | 1 | 36 | 0 | 0 | 6 | 1 | 0 | 0 |
TraesCS7A02G222200.1 | 0 | 0 | 0 | 0 | 62 | 13 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
TraesCS3A02G180100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
TraesCS7A02G222300.1 | 0 | 0 | 0 | 1 | 36 | 0 | 0 | 12 | 0 | 0 | 0 | 9 | 0 | 0 |
TraesCS5A02G400600.1 | 0 | 0 | 8 | 0 | 12 | 2 | 0 | 41 | 1 | 0 | 8 | 0 | 0 | 0 |
TraesCS7A02G428200.1 | 0 | 0 | 3 | 0 | 10 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3A02G325100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7A02G339600.1 | 0 | 0 | 8 | 0 | 7 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 |
TraesCS7A02G319100.1 | 0 | 0 | 1 | 0 | 12 | 0 | 0 | 21 | 0 | 0 | 2 | 0 | 0 | 0 |
TraesCS2A02G071700.1 | 0 | 0 | 11 | 0 | 2 | 8 | 1 | 0 | 0 | 0 | 3 | 4 | 0 | 0 |
TraesCS2A02G572500.1 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G399100.1 | 0 | 0 | 0 | 0 | 21 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
TraesCS7A02G250400.1 | 0 | 0 | 0 | 0 | 10 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2A02G082100.1 | 0 | 0 | 0 | 0 | 10 | 7 | 1 | 2 | 1 | 0 | 0 | 8 | 0 | 0 |
B
Download the VCF file:
download
Id | splice_region_variant&intron_variant | 3_prime_UTR_variant | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | splice_region_variant | upstream_gene_variant | synonymous_variant | missense_variant | intron_variant | 5_prime_UTR_variant |
---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS6B02G063800.1 | 0 | 0 | 12 | 0 | 0 | 0 | 12 | 2 | 2 | 4 | 0 |
TraesCS2B02G098400.1 | 0 | 2 | 12 | 0 | 0 | 0 | 28 | 2 | 0 | 0 | 0 |
TraesCS4B02G232800.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
TraesCS1B02G096900.1 | 0 | 2 | 16 | 0 | 0 | 0 | 4 | 0 | 0 | 6 | 2 |
TraesCS2B02G124600.1 | 0 | 4 | 0 | 0 | 0 | 0 | 12 | 4 | 2 | 0 | 0 |
TraesCS7B02G298400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 1 | 0 | 0 |
TraesCS1B02G115900.1 | 0 | 0 | 12 | 0 | 0 | 0 | 10 | 6 | 0 | 2 | 0 |
TraesCS4B02G105800.1 | 0 | 6 | 40 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 |
TraesCS1B02G142800.2 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 0 | 0 |
TraesCS2B02G251400.1 | 0 | 0 | 32 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
TraesCS2B02G173500.1 | 0 | 0 | 32 | 0 | 0 | 0 | 35 | 28 | 16 | 0 | 0 |
TraesCS6B02G109000.1 | 0 | 0 | 30 | 0 | 0 | 0 | 36 | 0 | 0 | 0 | 0 |
TraesCS5B02G405300.1 | 0 | 0 | 2 | 0 | 0 | 0 | 10 | 6 | 2 | 0 | 0 |
TraesCS2B02G285000.1 | 0 | 0 | 2 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 |
TraesCS7B02G375600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 18 | 0 | 14 | 6 |