TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | synonymous_variant | splice_region_variant&synonymous_variant | splice_acceptor_variant&intron_variant | intron_variant | upstream_gene_variant | 3_prime_UTR_variant | downstream_gene_variant | splice_donor_variant&intron_variant | stop_retained_variant | stop_lost | start_lost | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant | missense_variant | 5_prime_UTR_variant | stop_lost&splice_region_variant | missense_variant&splice_region_variant | stop_gained |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS5A02G514200.1 | 0 | 0 | 0 | 6 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 |
TraesCS5A02G281000.1 | 4 | 0 | 0 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 0 |
TraesCS1A02G351100.1 | 8 | 0 | 0 | 0 | 9 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 8 | 8 | 0 | 0 | 1 |
TraesCS5A02G065800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5A02G451100.1 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6A02G353300.1 | 0 | 0 | 0 | 2 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2A02G463100.1 | 16 | 0 | 0 | 8 | 44 | 2 | 45 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 6 | 13 | 0 | 0 | 0 |
TraesCS3A02G386700.1 | 2 | 0 | 0 | 0 | 4 | 0 | 8 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 7 | 0 | 0 | 0 | 0 |
TraesCS6A02G119500.1 | 0 | 0 | 0 | 2 | 4 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 1 |
TraesCS6A02G062200.1 | 1 | 0 | 0 | 7 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 |
TraesCS7A02G271900.1 | 5 | 0 | 0 | 0 | 20 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 |
TraesCS6A02G314800.1 | 2 | 0 | 0 | 3 | 30 | 1 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
TraesCS5A02G253800.1 | 5 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
TraesCS6A02G007500.1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS4A02G363600.1 | 0 | 0 | 0 | 0 | 11 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
download
Id | splice_donor_variant&intron_variant | splice_acceptor_variant&intron_variant | missense_variant | intron_variant | synonymous_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant | splice_region_variant | downstream_gene_variant | missense_variant&splice_region_variant | upstream_gene_variant | stop_lost | start_lost | splice_region_variant&synonymous_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | 3_prime_UTR_variant | stop_lost&splice_region_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS4B02G119200.1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
TraesCS1B02G406900.1 | 0 | 0 | 10 | 10 | 4 | 2 | 0 | 0 | 2 | 0 | 38 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G162500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7B02G348500.1 | 0 | 0 | 12 | 2 | 16 | 0 | 0 | 0 | 68 | 0 | 30 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G227500.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 10 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 4 | 0 |
TraesCS1B02G467600.1 | 0 | 0 | 18 | 0 | 22 | 0 | 0 | 0 | 102 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G112600.1 | 0 | 0 | 2 | 0 | 2 | 0 | 2 | 0 | 46 | 0 | 40 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G357300.1 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 44 | 0 | 28 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
TraesCS5B02G555700.1 | 0 | 0 | 4 | 4 | 2 | 0 | 0 | 0 | 2 | 0 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G396400.1 | 0 | 0 | 2 | 0 | 0 | 0 | 6 | 0 | 70 | 0 | 26 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
TraesCS1B02G271200.1 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 6 | 0 | 68 | 0 | 0 | 0 | 0 | 0 | 6 | 0 |
TraesCS7B02G022500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6B02G102400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G042400.1 | 0 | 0 | 2 | 12 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7B02G397900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |