TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | missense_variant | 3_prime_UTR_variant | splice_donor_variant&intron_variant | splice_region_variant&intron_variant | intron_variant | stop_gained | 5_prime_UTR_variant | missense_variant&splice_region_variant | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant | synonymous_variant | upstream_gene_variant | splice_region_variant&synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G523700.1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 44 | 0 | 0 | 10 | 13 | 0 |
| TraesCS5A02G473800.1 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 3 | 0 | 0 | 3 | 52 | 0 |
| TraesCS4A02G088400.1 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 19 | 0 |
| TraesCS5A02G112600.1 | 3 | 4 | 0 | 1 | 9 | 0 | 0 | 0 | 8 | 0 | 0 | 1 | 10 | 0 |
| TraesCS6A02G097700.1 | 12 | 7 | 0 | 0 | 11 | 0 | 1 | 0 | 30 | 0 | 0 | 2 | 36 | 0 |
| TraesCS3A02G313900.1 | 3 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 29 | 0 | 0 | 1 | 26 | 0 |
| TraesCS4A02G227400.1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 31 | 0 | 0 | 0 | 53 | 0 |
| TraesCS2A02G463400.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 29 | 0 | 0 | 1 | 11 | 0 |
| TraesCS2A02G109800.1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 38 | 0 | 0 | 1 | 3 | 0 |
| TraesCS6A02G208700.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 33 | 0 | 0 | 1 | 33 | 0 |
| TraesCS1A02G370700.1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 1 | 28 | 0 |
| TraesCS1A02G242800.1 | 2 | 0 | 0 | 1 | 8 | 0 | 0 | 0 | 29 | 0 | 0 | 4 | 25 | 0 |
| TraesCS1A02G370600.1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 26 | 0 |
| TraesCS7A02G495800.1 | 3 | 2 | 0 | 1 | 12 | 0 | 0 | 0 | 32 | 0 | 0 | 4 | 52 | 0 |
| TraesCS6A02G229500.1 | 2 | 4 | 0 | 1 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 15 | 1 |
B
Download the VCF file:
download
| Id | splice_region_variant&synonymous_variant | intron_variant | 3_prime_UTR_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | upstream_gene_variant | synonymous_variant | splice_region_variant | missense_variant&splice_region_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1B02G243200.1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 58 | 0 | 0 | 0 | 64 |
| TraesCS3B02G064900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 |
| TraesCS4B02G325700.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 15 | 1 | 0 | 0 | 13 |
| TraesCS4B02G088900.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 11 | 0 | 0 | 0 | 7 |
| TraesCS1B02G326600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 4 |
| TraesCS2B02G436300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 | 0 | 0 | 5 |
| TraesCS6B02G159600.1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 7 |
| TraesCS2B02G053900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 0 |
| TraesCS5B02G308400.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 19 | 0 | 0 | 0 | 29 |
| TraesCS3B02G266800.1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 26 | 0 | 0 | 0 | 0 |
| TraesCS5B02G193200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 17 | 0 | 0 | 0 | 24 |
| TraesCS7B02G278700.1 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 142 | 6 | 0 | 0 | 0 |
| TraesCS1B02G195700.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 17 | 0 | 0 | 0 | 31 |
| TraesCS5B02G178600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 1 | 0 | 0 | 0 |
| TraesCS2B02G436100.1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 11 | 1 | 0 | 0 | 8 |