TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | synonymous_variant | intron_variant | missense_variant | splice_region_variant&synonymous_variant | splice_region_variant&intron_variant | splice_donor_variant&intron_variant | splice_region_variant | 5_prime_UTR_variant | upstream_gene_variant | missense_variant&splice_region_variant | downstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_lost&splice_region_variant | stop_gained |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1A02G422800.1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| TraesCS6A02G353500.1 | 1 | 9 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 54 | 0 | 0 | 0 | 0 |
| TraesCS2A02G190200.1 | 2 | 5 | 2 | 0 | 0 | 0 | 0 | 2 | 76 | 0 | 10 | 9 | 0 | 0 | 0 |
| TraesCS1A02G342600.1 | 4 | 0 | 4 | 0 | 0 | 0 | 0 | 1 | 12 | 0 | 40 | 3 | 0 | 0 | 0 |
| TraesCS7A02G203700.1 | 25 | 25 | 22 | 0 | 0 | 0 | 0 | 4 | 94 | 0 | 11 | 15 | 0 | 0 | 0 |
| TraesCS3A02G039200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
download
| Id | splice_region_variant&synonymous_variant | downstream_gene_variant | upstream_gene_variant | synonymous_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | intron_variant | stop_gained | splice_region_variant&intron_variant | splice_region_variant | start_lost | splice_acceptor_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | missense_variant&splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G393400.1 | 0 | 0 | 8 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 |
| TraesCS7B02G290700.1 | 0 | 26 | 20 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G184900.1 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
| TraesCS2B02G080800.1 | 0 | 18 | 4 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G386100.1 | 0 | 12 | 60 | 2 | 2 | 0 | 8 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 2 |
| TraesCS4B02G059700.1 | 0 | 5 | 24 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| TraesCS7B02G110700.1 | 0 | 6 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G354200.1 | 0 | 42 | 4 | 8 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 0 |
| TraesCS5B02G521500.1 | 0 | 12 | 44 | 12 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 2 | 0 | 12 | 0 |
| TraesCS5B02G403300.1 | 0 | 0 | 16 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G273000.1 | 0 | 1 | 14 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G273200.1 | 0 | 11 | 19 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G301600.1 | 0 | 48 | 42 | 2 | 2 | 0 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G372400.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
| TraesCS2B02G227000.1 | 0 | 36 | 24 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |