TWGFD
The tetraploid wheat gene family database
A
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| Id | splice_acceptor_variant&intron_variant | downstream_gene_variant | stop_retained_variant | splice_region_variant&intron_variant | missense_variant | start_lost | missense_variant&splice_region_variant | splice_region_variant | stop_gained | synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | splice_region_variant&stop_retained_variant | intron_variant | 5_prime_UTR_variant | splice_donor_variant&intron_variant | 3_prime_UTR_variant | upstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS6A02G349700.1 | 0 | 29 | 0 | 0 | 3 | 0 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 26 |
| TraesCS2A02G545900.1 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 6 | 0 | 0 | 3 | 0 |
| TraesCS5A02G135100.1 | 0 | 39 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 31 | 0 | 0 | 0 | 54 |
| TraesCS3A02G139700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 31 |
| TraesCS4A02G290600.1 | 0 | 44 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 21 | 3 | 0 | 0 | 5 | 4 | 0 | 4 | 81 |
| TraesCS7A02G347800.1 | 0 | 29 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 15 |
| TraesCS5A02G072600.1 | 0 | 15 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 34 | 0 | 0 | 0 | 7 |
| TraesCS4A02G112900.1 | 0 | 0 | 0 | 3 | 2 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 27 | 0 | 0 | 2 | 91 |
| TraesCS5A02G155500.2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G521400.1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 7 |
| TraesCS6A02G251500.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 52 |
| TraesCS1A02G315400.1 | 0 | 45 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 19 | 0 | 0 | 5 | 56 |
| TraesCS5A02G378600.1 | 0 | 33 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 30 | 0 | 0 | 11 | 3 |
| TraesCS3A02G260500.1 | 0 | 14 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 25 |
| TraesCS7A02G296500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 12 |
B
Download the VCF file:
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| Id | splice_region_variant&intron_variant | synonymous_variant | splice_region_variant&synonymous_variant | stop_lost | stop_gained | intron_variant | splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | missense_variant | upstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G499500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TraesCS2B02G170200.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 6 | 2 | 22 | 0 | 0 | 0 |
| TraesCS7B02G171000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 42 | 0 | 34 | 0 | 0 | 0 |
| TraesCS2B02G086700.1 | 0 | 8 | 0 | 0 | 0 | 4 | 0 | 0 | 32 | 4 | 76 | 0 | 0 | 0 |
| TraesCS1B02G164800.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 2 | 32 | 0 | 0 | 0 |
| TraesCS7B02G094900.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 86 | 0 | 42 | 2 | 2 | 0 |
| TraesCS3B02G462400.1 | 0 | 8 | 0 | 0 | 0 | 2 | 0 | 0 | 58 | 4 | 60 | 0 | 0 | 0 |
| TraesCS3B02G376500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 29 | 0 | 23 | 0 | 0 | 0 |
| TraesCS5B02G442500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 |
| TraesCS6B02G310500.2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 2 | 0 | 0 | 0 |
| TraesCS6B02G286500.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 29 | 0 | 7 | 1 | 0 | 0 |
| TraesCS5B02G230500.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 1 | 41 | 2 | 0 | 0 |
| TraesCS6B02G289700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 31 | 0 | 7 | 0 | 0 | 0 |
| TraesCS5B02G483000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 |
| TraesCS2B02G417700.1 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 16 | 0 | 42 | 2 | 0 | 2 |