TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | intron_variant | stop_lost&splice_region_variant | splice_region_variant&synonymous_variant | synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | missense_variant&splice_region_variant | stop_gained | 5_prime_UTR_variant | missense_variant | 3_prime_UTR_variant | upstream_gene_variant | stop_retained_variant | splice_donor_variant&intron_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS2A02G186200.1 | 0 | 0 | 0 | 17 | 0 | 0 | 0 | 1 | 2 | 21 | 7 | 53 | 0 | 0 | 4 |
| TraesCS2A02G485100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 56 |
| TraesCS5A02G465700.1 | 5 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G001500.1 | 17 | 0 | 0 | 13 | 0 | 0 | 0 | 0 | 4 | 3 | 9 | 0 | 0 | 0 | 13 |
| TraesCS5A02G392500.1 | 19 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 3 | 8 | 76 | 0 | 0 | 18 |
| TraesCS5A02G005300.1 | 10 | 0 | 3 | 19 | 0 | 7 | 0 | 0 | 0 | 3 | 4 | 12 | 0 | 0 | 0 |
| TraesCS7A02G229600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| TraesCS6A02G308500.1 | 49 | 0 | 0 | 14 | 0 | 1 | 0 | 0 | 0 | 11 | 0 | 36 | 0 | 0 | 1 |
| TraesCS6A02G071900.1 | 18 | 0 | 0 | 9 | 0 | 1 | 0 | 0 | 1 | 4 | 0 | 46 | 0 | 0 | 0 |
| TraesCS1A02G264400.1 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 28 | 0 | 0 | 11 |
B
Download the VCF file:
download
| Id | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | synonymous_variant | intron_variant | 5_prime_UTR_variant | stop_gained | upstream_gene_variant | upstream_geTraesCS3B02G094500.1 | splice_region_variant&synonymous_variant | 3_prime_UTR_variant | downstream_gene_variant | stop_lost | missense_variant&splice_region_variant | splice_region_variant | splice_region_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G159000.1 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 |
| TraesCS5B02G354000.1 | 0 | 22 | 24 | 0 | 0 | 0 | 52 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G352300.1 | 0 | 2 | 4 | 12 | 0 | 0 | 30 | 0 | 0 | 2 | 78 | 0 | 0 | 0 | 0 |
| TraesCS5B02G415000.1 | 0 | 6 | 0 | 2 | 0 | 0 | 78 | 0 | 0 | 4 | 88 | 0 | 0 | 2 | 0 |
| TraesCS5B02G354400.1 | 0 | 6 | 2 | 0 | 0 | 0 | 10 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G119200.1 | 0 | 0 | 2 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G383800.1 | 0 | 0 | 4 | 4 | 0 | 0 | 64 | 0 | 0 | 0 | 36 | 0 | 0 | 0 | 0 |
| TraesCS7B02G162500.1 | 0 | 0 | 2 | 6 | 0 | 0 | 58 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| TraesCS7B02G195700.1 | 0 | 10 | 12 | 96 | 0 | 0 | 58 | 0 | 0 | 0 | 30 | 0 | 0 | 0 | 0 |
| TraesCS4B02G049800.1 | 0 | 0 | 8 | 2 | 0 | 0 | 42 | 0 | 0 | 6 | 116 | 0 | 0 | 0 | 0 |
| TraesCS5B02G526200.1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G146100.1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 |
| TraesCS5B02G354200.1 | 0 | 18 | 8 | 4 | 2 | 0 | 4 | 0 | 0 | 0 | 42 | 0 | 0 | 0 | 0 |
| TraesCS1B02G351900.1 | 0 | 2 | 2 | 2 | 0 | 0 | 38 | 0 | 0 | 0 | 44 | 0 | 0 | 0 | 0 |
| TraesCS2B02G226200.1 | 0 | 0 | 2 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |