TWGFD
The tetraploid wheat gene family database
A
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| Id | synonymous_variant | 5_prime_UTR_variant | upstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | missense_variant | intron_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|
| TraesCS4A02G194800.1 | 6 | 3 | 34 | 1 | 0 | 0 | 4 | 0 | 13 |
| TraesCS3A02G135700.1 | 4 | 2 | 32 | 1 | 0 | 0 | 1 | 0 | 31 |
| TraesCS7A02G352200.1 | 4 | 1 | 12 | 1 | 0 | 0 | 2 | 0 | 71 |
| TraesCS5A02G377900.1 | 4 | 1 | 24 | 0 | 0 | 0 | 0 | 0 | 4 |
| TraesCS3A02G306000.1 | 3 | 3 | 58 | 0 | 1 | 0 | 4 | 1 | 58 |
| TraesCS6A02G135100.1 | 9 | 0 | 9 | 0 | 0 | 0 | 1 | 0 | 39 |
| TraesCS5A02G148000.1 | 4 | 12 | 20 | 2 | 3 | 0 | 3 | 9 | 14 |
| TraesCS3A02G200900.1 | 2 | 0 | 59 | 0 | 0 | 0 | 1 | 37 | 15 |
| TraesCS3A02G446800.1 | 1 | 0 | 30 | 1 | 0 | 0 | 2 | 0 | 9 |
| TraesCS3A02G346100.1 | 3 | 5 | 0 | 8 | 1 | 0 | 2 | 0 | 26 |
| TraesCS1A02G333800.1 | 8 | 0 | 28 | 0 | 0 | 0 | 0 | 0 | 36 |
| TraesCS3A02G305900.1 | 14 | 1 | 16 | 1 | 1 | 0 | 2 | 13 | 18 |
| TraesCS2A02G536100.1 | 1 | 0 | 1 | 0 | 0 | 0 | 4 | 0 | 0 |
| TraesCS4A02G136500.1 | 0 | 1 | 9 | 0 | 0 | 1 | 0 | 0 | 0 |
| TraesCS1A02G299600.1 | 5 | 0 | 36 | 2 | 0 | 0 | 2 | 0 | 5 |
B
Download the VCF file:
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| Id | downstream_gene_variant | upstream_gene_variant | synonymous_variant | splice_region_variant | 3_prime_UTR_variant | missense_variant | stop_retained_variant | intron_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G153800.1 | 22 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G319900.1 | 0 | 40 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| TraesCS4B02G120400.1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G123900.1 | 4 | 13 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 1 |
| TraesCS5B02G223800.1 | 9 | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G309400.1 | 0 | 73 | 8 | 0 | 1 | 3 | 1 | 0 | 0 | 0 |
| TraesCS2B02G271700.1 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 0 |
| TraesCS2B02G566800.1 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G377800.1 | 32 | 23 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
| TraesCS3B02G169300.1 | 0 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G330600.1 | 6 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G330500.1 | 8 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G482200.1 | 11 | 38 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| TraesCS4B02G115400.1 | 10 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G381500.1 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |