TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | stop_lost | missense_variant | missense_variant&splice_region_variant | stop_retained_variant | splice_region_variant&intron_variant | downstream_gene_variant | synonymous_variant | 5_prime_UTR_variant | upstream_gene_variant | splice_acceptor_variant&intron_variant | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | stop_lost&splice_region_variant | stop_gained | splice_region_variant | intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3A02G528100.1 | 0 | 1 | 0 | 0 | 0 | 11 | 1 | 0 | 21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G152400.1 | 0 | 1 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G546500.1 | 0 | 0 | 0 | 0 | 0 | 151 | 0 | 0 | 33 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G021900.1 | 0 | 7 | 0 | 0 | 0 | 16 | 9 | 3 | 5 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 7 |
| TraesCS4A02G355800.1 | 0 | 0 | 0 | 0 | 0 | 13 | 1 | 0 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7A02G215500.1 | 0 | 1 | 0 | 0 | 0 | 28 | 2 | 0 | 76 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
| TraesCS4A02G063900.1 | 0 | 1 | 0 | 0 | 0 | 8 | 5 | 0 | 89 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G233000.1 | 0 | 3 | 0 | 0 | 0 | 53 | 15 | 4 | 9 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 33 |
| TraesCS5A02G556000.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3A02G332100.1 | 0 | 0 | 0 | 0 | 0 | 51 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G325100.1 | 0 | 8 | 0 | 0 | 0 | 52 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| TraesCS2A02G400400.1 | 0 | 8 | 0 | 0 | 1 | 46 | 9 | 3 | 20 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 10 |
| TraesCS5A02G334500.1 | 0 | 4 | 0 | 0 | 0 | 24 | 0 | 0 | 67 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| TraesCS6A02G130100.1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1A02G292500.1 | 0 | 1 | 0 | 0 | 0 | 33 | 3 | 2 | 52 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
B
Download the VCF file:
download
| Id | splice_region_variant | 3_prime_UTR_variant | intron_variant | splice_region_variant&stop_retained_variant | downstream_gene_variant | 5_prime_UTR_variant | upstream_gene_variant | synonymous_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | missense_variant&splice_region_variant | stop_retained_variant | splice_region_variant&synonymous_variant | start_lost | stop_lost | stop_gained |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS6B02G279400.1 | 0 | 1 | 0 | 0 | 44 | 0 | 28 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G069400.1 | 0 | 2 | 20 | 0 | 20 | 0 | 10 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G091500.1 | 0 | 2 | 2 | 0 | 56 | 0 | 24 | 4 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G184500.1 | 0 | 4 | 16 | 0 | 0 | 0 | 26 | 10 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G168800.1 | 0 | 0 | 0 | 0 | 12 | 0 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G256400.1 | 0 | 4 | 0 | 0 | 40 | 0 | 42 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G154000.1 | 0 | 2 | 26 | 0 | 16 | 0 | 44 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G362200.1 | 0 | 0 | 0 | 0 | 8 | 0 | 19 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G408000.1 | 0 | 2 | 0 | 0 | 31 | 0 | 38 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G204100.1 | 0 | 0 | 0 | 0 | 3 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G253700.1 | 0 | 0 | 4 | 0 | 40 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS2B02G357200.1 | 0 | 0 | 0 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G384800.1 | 0 | 0 | 0 | 0 | 32 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G279200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 32 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G358300.1 | 0 | 0 | 16 | 0 | 44 | 0 | 18 | 6 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |