TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | splice_acceptor_variant&intron_variant | downstream_gene_variant | stop_retained_variant | splice_region_variant&intron_variant | missense_variant | start_lost | missense_variant&splice_region_variant | splice_region_variant | stop_gained | synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&synonymous_variant | splice_region_variant&stop_retained_variant | intron_variant | 5_prime_UTR_variant | splice_donor_variant&intron_variant | 3_prime_UTR_variant | upstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G129900.1 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 12 |
| TraesCS3A02G411200.1 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4A02G162000.1 | 0 | 26 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 75 | 0 | 0 | 0 | 31 |
| TraesCS6A02G255700.1 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 18 | 1 | 0 | 2 | 35 |
| TraesCS4A02G220900.1 | 0 | 77 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 9 |
| TraesCS2A02G168700.1 | 0 | 63 | 0 | 0 | 9 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 48 |
| TraesCS5A02G426200.1 | 0 | 20 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 23 |
| TraesCS7A02G555900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| TraesCS2A02G475800.1 | 0 | 22 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 11 |
| TraesCS6A02G259200.1 | 0 | 52 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 71 |
| TraesCS7A02G555800.1 | 0 | 15 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7A02G347900.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 58 |
| TraesCS7A02G228200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 28 | 0 | 0 | 6 | 25 |
| TraesCS5A02G372500.1 | 0 | 40 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| TraesCS5A02G049400.1 | 0 | 11 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 | 2 | 0 | 2 | 69 |
B
Download the VCF file:
download
| Id | splice_region_variant&intron_variant | synonymous_variant | splice_region_variant&synonymous_variant | stop_lost | stop_gained | intron_variant | splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | missense_variant | upstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G065600.1 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 32 | 0 | 24 | 0 | 0 | 0 |
| TraesCS6B02G273800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 13 | 0 | 0 | 0 |
| TraesCS1B02G216000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 9 | 0 | 2 | 0 | 0 | 0 |
| TraesCS2B02G529100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 1 | 8 | 0 | 0 | 0 |
| TraesCS3B02G164900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 13 | 0 | 20 | 0 | 0 | 0 |
| TraesCS1B02G179000.1 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 21 | 0 | 16 | 0 | 0 | 0 |
| TraesCS1B02G132800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 52 | 0 | 4 | 0 | 0 | 0 |
| TraesCS1B02G145400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G007600.1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G382300.1 | 0 | 26 | 0 | 0 | 0 | 30 | 0 | 2 | 0 | 6 | 42 | 0 | 2 | 0 |
| TraesCS1B02G254700.1 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 14 | 0 | 6 | 0 | 0 | 0 |
| TraesCS5B02G281700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 28 | 2 | 0 | 0 |
| TraesCS5B02G181400.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 12 | 0 | 18 | 2 | 0 | 0 |
| TraesCS5B02G246000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 27 | 0 | 0 | 0 |
| TraesCS7B02G236000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 1 | 0 | 1 | 0 |