TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | synonymous_variant | splice_region_variant | stop_gained | 5_prime_UTR_variant | upstream_gene_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | intron_variant | downstream_gene_variant | missense_variant | splice_region_variant&synonymous_variant | stop_lost&splice_region_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G441900.1 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 |
| TraesCS4A02G234500.1 | 9 | 1 | 0 | 5 | 31 | 17 | 2 | 1 | 5 | 18 | 2 | 0 | 0 |
| TraesCS3A02G028200.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6A02G264200.1 | 4 | 0 | 0 | 1 | 7 | 3 | 0 | 0 | 12 | 27 | 4 | 0 | 0 |
| TraesCS6A02G335500.1 | 0 | 0 | 0 | 0 | 18 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 |
| TraesCS6A02G276100.1 | 0 | 0 | 0 | 0 | 67 | 2 | 0 | 0 | 0 | 49 | 0 | 0 | 0 |
| TraesCS6A02G142000.1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 |
| TraesCS2A02G271700.1 | 1 | 0 | 0 | 0 | 56 | 1 | 0 | 0 | 5 | 6 | 0 | 0 | 0 |
| TraesCS7A02G323000.1 | 3 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 5 | 44 | 2 | 0 | 0 |
| TraesCS3A02G421400.1 | 2 | 0 | 0 | 0 | 44 | 0 | 0 | 3 | 7 | 31 | 3 | 0 | 0 |
| TraesCS3A02G489400.1 | 2 | 0 | 0 | 2 | 55 | 4 | 0 | 0 | 3 | 11 | 3 | 0 | 0 |
| TraesCS3A02G006300.1 | 3 | 0 | 0 | 1 | 25 | 0 | 0 | 0 | 4 | 26 | 3 | 0 | 0 |
| TraesCS7A02G421000.1 | 2 | 0 | 0 | 2 | 11 | 6 | 0 | 1 | 38 | 18 | 5 | 0 | 0 |
| TraesCS4A02G047700.1 | 1 | 0 | 0 | 1 | 26 | 0 | 1 | 2 | 0 | 0 | 3 | 0 | 0 |
| TraesCS6A02G358400.3 | 2 | 0 | 0 | 0 | 23 | 2 | 0 | 0 | 0 | 18 | 5 | 0 | 0 |
B
Download the VCF file:
download
| Id | 3_prime_UTR_variant | splice_region_variant&synonymous_variant | upstream_gene_variant | intron_variant | splice_region_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | stop_lost | 5_prime_UTR_variant | synonymous_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS6B02G303500.1 | 2 | 0 | 60 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 34 |
| TraesCS4B02G397400.1 | 4 | 0 | 0 | 52 | 0 | 2 | 0 | 22 | 0 | 0 | 14 | 28 |
| TraesCS6B02G142000.1 | 0 | 0 | 30 | 16 | 0 | 0 | 0 | 4 | 0 | 0 | 10 | 26 |
| TraesCS3B02G344000.1 | 0 | 0 | 28 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 28 |
| TraesCS3B02G474700.1 | 0 | 0 | 54 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 20 |
| TraesCS5B02G235200.1 | 0 | 0 | 21 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 |
| TraesCS6B02G317600.1 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7B02G223900.1 | 0 | 0 | 23 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 8 |
| TraesCS3B02G185400.1 | 4 | 0 | 42 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 22 |
| TraesCS4B02G397800.1 | 0 | 0 | 2 | 8 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 |
| TraesCS5B02G292100.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 |
| TraesCS6B02G215200.1 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 10 |
| TraesCS5B02G229000.1 | 0 | 0 | 76 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 64 |
| TraesCS3B02G476000.1 | 2 | 0 | 34 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 56 |
| TraesCS4B02G021500.1 | 0 | 0 | 6 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |