TWGFD
The tetraploid wheat gene family database
A
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| Id | splice_region_variant&intron_variant | synonymous_variant | 5_prime_UTR_variant | splice_donor_variant&intron_variant | 3_prime_UTR_variant | downstream_gene_variant | missense_variant | splice_region_variant | 5_prime_UTR_premature_start_codon_gain_variant | intron_variant | upstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS7A02G214600.1 | 0 | 0 | 0 | 0 | 0 | 59 | 0 | 0 | 0 | 0 | 49 |
| TraesCS1A02G355900.1 | 0 | 0 | 0 | 0 | 0 | 45 | 0 | 0 | 0 | 0 | 9 |
| TraesCS6A02G117200.1 | 0 | 1 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 27 |
| TraesCS7A02G474800.1 | 0 | 1 | 1 | 1 | 3 | 36 | 2 | 0 | 0 | 34 | 21 |
| TraesCS6A02G287300.1 | 0 | 0 | 0 | 0 | 0 | 77 | 0 | 0 | 0 | 0 | 51 |
| TraesCS5A02G256500.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 |
| TraesCS1A02G411700.1 | 2 | 0 | 2 | 0 | 3 | 14 | 0 | 0 | 0 | 0 | 50 |
| TraesCS4A02G325900.1 | 0 | 1 | 0 | 0 | 0 | 11 | 1 | 0 | 0 | 0 | 30 |
| TraesCS5A02G384300.1 | 0 | 4 | 0 | 0 | 6 | 4 | 1 | 0 | 0 | 0 | 16 |
| TraesCS4A02G260400.1 | 0 | 2 | 0 | 0 | 0 | 17 | 0 | 0 | 0 | 0 | 72 |
| TraesCS3A02G088800.1 | 0 | 1 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 51 |
| TraesCS3A02G102400.1 | 0 | 0 | 0 | 0 | 5 | 9 | 0 | 0 | 0 | 0 | 21 |
| TraesCS3A02G352900.1 | 1 | 2 | 0 | 0 | 0 | 15 | 0 | 0 | 0 | 0 | 43 |
| TraesCS5A02G051900.1 | 0 | 2 | 0 | 1 | 3 | 6 | 0 | 1 | 0 | 5 | 35 |
| TraesCS6A02G061700.1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 12 |
B
Download the VCF file:
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| Id | 5_prime_UTR_variant | downstream_gene_variant | 3_prime_UTR_variant | missense_variant | splice_region_variant&intron_variant | upstream_gene_variant | synonymous_variant | intron_variant |
|---|---|---|---|---|---|---|---|---|
| TraesCS4B02G052900.1 | 2 | 24 | 2 | 0 | 0 | 10 | 0 | 0 |
| TraesCS1B02G294500.1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| TraesCS4B02G054200.1 | 0 | 11 | 0 | 0 | 0 | 20 | 0 | 0 |
| TraesCS5B02G255900.1 | 0 | 13 | 0 | 0 | 0 | 17 | 1 | 0 |
| TraesCS3B02G487800.1 | 0 | 40 | 2 | 0 | 2 | 58 | 0 | 32 |
| TraesCS7B02G248300.1 | 0 | 25 | 0 | 2 | 0 | 3 | 0 | 0 |
| TraesCS3B02G017400.1 | 0 | 3 | 1 | 3 | 0 | 2 | 1 | 0 |
| TraesCS5B02G389100.1 | 0 | 1 | 1 | 0 | 0 | 24 | 0 | 0 |
| TraesCS7B02G449800.1 | 0 | 2 | 14 | 0 | 0 | 2 | 0 | 0 |
| TraesCS3B02G385600.1 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G316700.1 | 0 | 10 | 0 | 0 | 0 | 20 | 0 | 0 |
| TraesCS6B02G144900.1 | 0 | 22 | 0 | 0 | 0 | 2 | 0 | 0 |
| TraesCS5B02G473100.1 | 2 | 62 | 2 | 4 | 0 | 44 | 2 | 0 |
| TraesCS5B02G058200.1 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 |
| TraesCS6B02G145200.1 | 0 | 5 | 5 | 0 | 0 | 62 | 0 | 0 |