TWGFD
The tetraploid wheat gene family database
A
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| Id | splice_region_variant&synonymous_variant | downstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant | splice_region_variant&intron_variant | splice_region_variant | intron_variant | missense_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | upstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G437900.1 | 0 | 4 | 0 | 11 | 0 | 0 | 0 | 2 | 15 | 0 | 0 |
| TraesCS3A02G229000.1 | 0 | 98 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 1 | 76 |
| TraesCS4A02G027700.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 4 | 1 | 1 | 26 |
| TraesCS5A02G237600.1 | 0 | 2 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 35 |
| TraesCS7A02G360400.1 | 0 | 6 | 0 | 2 | 0 | 0 | 0 | 4 | 4 | 0 | 56 |
| TraesCS5A02G548700.1 | 0 | 24 | 0 | 4 | 0 | 2 | 0 | 4 | 12 | 0 | 60 |
| TraesCS2A02G089300.1 | 0 | 2 | 0 | 4 | 0 | 0 | 19 | 5 | 2 | 3 | 23 |
| TraesCS3A02G405200.1 | 0 | 14 | 0 | 8 | 0 | 0 | 1 | 9 | 3 | 0 | 44 |
| TraesCS3A02G393100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 6 |
| TraesCS5A02G550700.1 | 0 | 22 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 |
| TraesCS4A02G062800.1 | 0 | 17 | 0 | 3 | 0 | 0 | 30 | 6 | 3 | 0 | 4 |
| TraesCS2A02G401600.1 | 0 | 42 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 0 |
| TraesCS4A02G322300.1 | 0 | 1 | 0 | 8 | 0 | 0 | 24 | 0 | 3 | 0 | 19 |
| TraesCS7A02G355300.1 | 0 | 30 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 49 |
| TraesCS3A02G280800.1 | 0 | 92 | 0 | 3 | 0 | 0 | 0 | 3 | 0 | 2 | 1 |
B
Download the VCF file:
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| Id | missense_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant | synonymous_variant | splice_region_variant | 3_prime_UTR_variant | downstream_gene_variant | upstream_gene_variant | intron_variant |
|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G556200.1 | 0 | 0 | 2 | 2 | 0 | 0 | 36 | 0 | 64 |
| TraesCS3B02G425200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 78 | 34 | 0 |
| TraesCS3B02G568200.1 | 6 | 0 | 0 | 7 | 0 | 0 | 48 | 62 | 0 |
| TraesCS7B02G267300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 40 | 0 |
| TraesCS3B02G438900.1 | 2 | 0 | 6 | 2 | 0 | 4 | 18 | 44 | 20 |
| TraesCS1B02G396000.1 | 2 | 2 | 0 | 0 | 0 | 2 | 6 | 16 | 0 |