TWGFD
The tetraploid wheat gene family database
A
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| Id | splice_region_variant&synonymous_variant | intron_variant | splice_region_variant&intron_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | splice_donor_variant&intron_variant | splice_region_variant | stop_gained | upstream_gene_variant | 5_prime_UTR_variant | 3_prime_UTR_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS7A02G477300.1 | 0 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 1 | 42 | 0 | 0 | 6 |
| TraesCS3A02G521300.1 | 0 | 38 | 0 | 5 | 0 | 9 | 0 | 0 | 0 | 0 | 0 | 4 | 6 |
| TraesCS6A02G245400.1 | 0 | 0 | 0 | 12 | 0 | 0 | 0 | 0 | 1 | 43 | 0 | 0 | 12 |
| TraesCS5A02G294700.1 | 0 | 0 | 1 | 9 | 0 | 19 | 0 | 0 | 0 | 28 | 1 | 1 | 2 |
| TraesCS7A02G364200.1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 15 | 0 | 1 |
| TraesCS6A02G382300.1 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 18 | 0 | 0 | 6 |
| TraesCS5A02G294600.1 | 0 | 7 | 1 | 9 | 0 | 0 | 0 | 0 | 0 | 15 | 0 | 0 | 6 |
| TraesCS6A02G312600.1 | 0 | 0 | 0 | 2 | 0 | 34 | 0 | 0 | 0 | 38 | 6 | 0 | 4 |
| TraesCS3A02G376900.1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 8 |
| TraesCS1A02G013700.1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 |
| TraesCS5A02G317300.1 | 1 | 12 | 0 | 3 | 1 | 42 | 0 | 0 | 0 | 18 | 3 | 0 | 0 |
| TraesCS7A02G233400.1 | 0 | 24 | 0 | 9 | 0 | 41 | 0 | 1 | 0 | 61 | 1 | 3 | 12 |
| TraesCS2A02G276400.1 | 0 | 11 | 0 | 2 | 0 | 45 | 0 | 0 | 0 | 59 | 0 | 1 | 6 |
| TraesCS7A02G293900.1 | 0 | 0 | 0 | 4 | 0 | 16 | 0 | 0 | 0 | 47 | 0 | 4 | 4 |
| TraesCS2A02G450300.1 | 0 | 0 | 0 | 0 | 0 | 19 | 0 | 0 | 0 | 27 | 0 | 0 | 0 |
B
Download the VCF file:
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| Id | intron_variant | splice_region_variant&intron_variant | missense_variant&splice_region_variant | missense_variant | stop_gained | 3_prime_UTR_variant | 5_prime_UTR_variant | downstream_gene_variant | upstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS2B02G366200.1 | 0 | 4 | 0 | 2 | 0 | 0 | 0 | 6 | 0 | 0 | 6 |
| TraesCS7B02G021200.1 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 40 | 28 | 0 | 4 |
| TraesCS3B02G377600.1 | 4 | 0 | 0 | 1 | 0 | 2 | 1 | 37 | 28 | 0 | 1 |
| TraesCS4B02G371600.1 | 0 | 2 | 0 | 10 | 0 | 0 | 0 | 0 | 12 | 0 | 2 |
| TraesCS2B02G499300.1 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 10 | 8 | 0 | 4 |
| TraesCS6B02G209000.1 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 6 | 0 | 0 | 1 |
| TraesCS7B02G100600.1 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 1 | 27 | 0 | 0 |
| TraesCS6B02G420600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 1 | 0 | 0 |
| TraesCS5B02G202600.1 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 30 | 22 | 0 | 0 |
| TraesCS7B02G473200.1 | 0 | 0 | 0 | 26 | 0 | 18 | 8 | 36 | 10 | 2 | 42 |
| TraesCS6B02G421400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 13 | 0 | 0 | 0 |
| TraesCS2B02G315100.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 16 | 4 | 0 | 0 |
| TraesCS6B02G342800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 23 | 0 | 0 |
| TraesCS6B02G290700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 3 | 0 | 0 |
| TraesCS6B02G278900.1 | 8 | 0 | 2 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |