TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | intron_variant | stop_lost&splice_region_variant | splice_region_variant&synonymous_variant | synonymous_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | missense_variant&splice_region_variant | stop_gained | 5_prime_UTR_variant | missense_variant | 3_prime_UTR_variant | upstream_gene_variant | stop_retained_variant | splice_donor_variant&intron_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS1A02G342600.1 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 1 | 4 | 3 | 12 | 0 | 0 | 40 |
| TraesCS3A02G420200.2 | 11 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 2 | 0 | 45 | 0 | 0 | 65 |
| TraesCS1A02G344600.1 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 | 0 | 16 | 0 | 0 | 0 | 0 | 8 |
| TraesCS4A02G047200.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 36 | 0 | 0 | 1 |
| TraesCS6A02G353500.1 | 9 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 54 |
| TraesCS4A02G414600.1 | 39 | 0 | 0 | 5 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 |
| TraesCS7A02G388800.1 | 4 | 0 | 1 | 7 | 0 | 2 | 0 | 0 | 0 | 0 | 6 | 39 | 0 | 0 | 16 |
| TraesCS7A02G203700.1 | 25 | 0 | 0 | 25 | 0 | 0 | 0 | 0 | 4 | 22 | 15 | 94 | 0 | 0 | 11 |
| TraesCS2A02G217000.1 | 88 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 59 |
| TraesCS2A02G537900.2 | 0 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 3 |
| TraesCS1A02G131600.1 | 30 | 0 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 16 | 0 | 0 | 38 |
| TraesCS4A02G224700.1 | 9 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 5 | 3 | 10 | 36 | 0 | 0 | 17 |
| TraesCS5A02G147500.1 | 20 | 0 | 0 | 6 | 1 | 0 | 0 | 0 | 7 | 2 | 2 | 3 | 0 | 0 | 85 |
| TraesCS3A02G101800.1 | 0 | 0 | 0 | 28 | 0 | 0 | 0 | 0 | 0 | 2 | 15 | 14 | 0 | 0 | 0 |
| TraesCS2A02G462700.1 | 0 | 0 | 0 | 19 | 0 | 4 | 0 | 0 | 0 | 0 | 4 | 14 | 0 | 0 | 25 |
B
Download the VCF file:
download
| Id | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | synonymous_variant | intron_variant | 5_prime_UTR_variant | stop_gained | upstream_gene_variant | upstream_geTraesCS3B02G094500.1 | splice_region_variant&synonymous_variant | 3_prime_UTR_variant | downstream_gene_variant | stop_lost | missense_variant&splice_region_variant | splice_region_variant | splice_region_variant&intron_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS4B02G170700.1 | 0 | 0 | 0 | 0 | 0 | 0 | 28 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 |
| TraesCS5B02G319800.1 | 0 | 2 | 6 | 4 | 0 | 0 | 30 | 0 | 0 | 0 | 20 | 0 | 0 | 0 | 0 |
| TraesCS5B02G112900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 |
| TraesCS2B02G602000.1 | 0 | 4 | 0 | 0 | 0 | 0 | 102 | 0 | 0 | 0 | 34 | 0 | 0 | 0 | 0 |
| TraesCS6B02G379500.1 | 0 | 1 | 1 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 23 | 0 | 0 | 0 | 0 |
| TraesCS4B02G041600.1 | 0 | 0 | 4 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 2 |
| TraesCS5B02G481700.1 | 0 | 2 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| TraesCS6B02G386100.1 | 0 | 2 | 2 | 8 | 0 | 0 | 60 | 0 | 0 | 2 | 12 | 0 | 2 | 0 | 2 |
| TraesCS5B02G565100.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 | 0 |
| TraesCS7B02G270900.1 | 0 | 0 | 2 | 0 | 0 | 0 | 16 | 0 | 0 | 0 | 26 | 0 | 0 | 0 | 0 |
| TraesCS7B02G404400.1 | 0 | 0 | 1 | 0 | 0 | 0 | 13 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 |
| TraesCS7B02G131000.1 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 48 | 0 | 0 | 0 | 0 |
| TraesCS4B02G127400.1 | 0 | 0 | 2 | 2 | 0 | 0 | 10 | 0 | 0 | 2 | 20 | 0 | 0 | 0 | 0 |
| TraesCS1B02G454100.1 | 0 | 2 | 2 | 0 | 0 | 0 | 66 | 0 | 0 | 8 | 36 | 0 | 0 | 0 | 0 |
| TraesCS1B02G251700.1 | 0 | 6 | 2 | 20 | 2 | 0 | 60 | 0 | 0 | 14 | 62 | 2 | 0 | 0 | 0 |