TWGFD
The tetraploid wheat gene family database
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| Id | stop_retained_variant | intron_variant | synonymous_variant | splice_region_variant&synonymous_variant | splice_acceptor_variant&intron_variant | splice_region_variant&intron_variant | upstream_gene_variant | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant&splice_region_variant | 3_prime_UTR_variant | 5_prime_UTR_variant | downstream_gene_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3A02G358200.1 | 0 | 4 | 1 | 0 | 0 | 0 | 34 | 0 | 0 | 0 | 0 | 0 | 3 |
| TraesCS4A02G405800.1 | 1 | 1 | 0 | 0 | 0 | 0 | 91 | 1 | 0 | 0 | 8 | 4 | 35 |
| TraesCS5A02G515000.1 | 0 | 1 | 7 | 0 | 0 | 2 | 65 | 0 | 0 | 0 | 3 | 1 | 10 |
| TraesCS7A02G083800.1 | 0 | 0 | 9 | 0 | 0 | 0 | 7 | 5 | 0 | 0 | 4 | 0 | 71 |
| TraesCS2A02G415900.1 | 0 | 2 | 2 | 1 | 0 | 2 | 11 | 2 | 0 | 0 | 3 | 1 | 58 |
| TraesCS3A02G273300.1 | 0 | 3 | 5 | 0 | 0 | 0 | 38 | 4 | 0 | 0 | 4 | 3 | 33 |
| TraesCS4A02G072000.1 | 0 | 4 | 0 | 0 | 0 | 0 | 12 | 2 | 0 | 0 | 0 | 0 | 8 |
| TraesCS3A02G368100.1 | 0 | 0 | 2 | 0 | 0 | 0 | 37 | 0 | 0 | 0 | 2 | 0 | 32 |
| TraesCS5A02G330200.1 | 0 | 37 | 10 | 0 | 0 | 1 | 21 | 12 | 0 | 1 | 0 | 0 | 1 |
| TraesCS2A02G188500.1 | 0 | 0 | 1 | 0 | 0 | 0 | 46 | 1 | 0 | 0 | 0 | 0 | 62 |
| TraesCS3A02G341700.1 | 0 | 0 | 3 | 0 | 0 | 0 | 9 | 1 | 0 | 0 | 1 | 1 | 21 |
| TraesCS5A02G375800.1 | 0 | 69 | 19 | 0 | 0 | 2 | 9 | 4 | 0 | 0 | 0 | 1 | 24 |
| TraesCS1A02G372900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 29 | 6 | 0 | 0 | 6 | 0 | 17 |
| TraesCS5A02G043400.1 | 0 | 4 | 6 | 0 | 0 | 0 | 24 | 0 | 0 | 0 | 2 | 0 | 58 |
| TraesCS5A02G549700.1 | 0 | 23 | 10 | 0 | 0 | 0 | 9 | 0 | 1 | 0 | 0 | 2 | 24 |
B
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| Id | 3_prime_UTR_variant | stop_gained | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant&intron_variant | 5_prime_UTR_variant | downstream_gene_variant | intron_variant | stop_retained_variant | upstream_gene_variant | missense_variant | missense_variant&splice_region_variant | splice_region_variant | synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G331200.1 | 0 | 0 | 2 | 0 | 0 | 42 | 2 | 0 | 106 | 6 | 0 | 0 | 0 |
| TraesCS4B02G025400.1 | 0 | 0 | 0 | 0 | 0 | 22 | 0 | 0 | 122 | 2 | 0 | 0 | 2 |
| TraesCS7B02G072700.1 | 2 | 0 | 0 | 0 | 0 | 30 | 0 | 0 | 20 | 0 | 0 | 0 | 0 |
| TraesCS5B02G197700.1 | 0 | 0 | 0 | 0 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS6B02G321100.1 | 0 | 0 | 0 | 0 | 0 | 68 | 2 | 0 | 44 | 2 | 0 | 0 | 0 |
| TraesCS1B02G069000.1 | 0 | 0 | 0 | 0 | 0 | 32 | 0 | 0 | 38 | 2 | 0 | 0 | 0 |
| TraesCS2B02G117900.1 | 0 | 0 | 0 | 0 | 2 | 18 | 0 | 0 | 14 | 2 | 0 | 0 | 0 |
| TraesCS2B02G268200.1 | 0 | 0 | 0 | 0 | 0 | 26 | 6 | 0 | 78 | 0 | 0 | 0 | 0 |
| TraesCS6B02G467500.1 | 10 | 0 | 0 | 0 | 0 | 366 | 92 | 0 | 178 | 32 | 2 | 0 | 20 |
| TraesCS6B02G096500.1 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 34 | 0 | 0 | 0 | 0 |
| TraesCS3B02G138600.1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 4 | 0 | 0 | 0 | 0 |
| TraesCS1B02G091600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 2 | 0 | 0 | 0 | 0 |
| TraesCS1B02G045500.1 | 12 | 0 | 0 | 0 | 0 | 28 | 12 | 0 | 12 | 0 | 0 | 0 | 4 |
| TraesCS5B02G047200.1 | 6 | 0 | 0 | 0 | 0 | 10 | 4 | 0 | 72 | 0 | 0 | 0 | 2 |
| TraesCS3B02G260800.1 | 0 | 0 | 0 | 0 | 0 | 18 | 12 | 0 | 20 | 0 | 0 | 0 | 0 |