TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
Id | 5_prime_UTR_variant | missense_variant&splice_region_variant | synonymous_variant | splice_region_variant&intron_variant | splice_donor_variant&intron_variant | missense_variant | intron_variant | 3_prime_UTR_variant | 5_prime_UTR_premature_start_codon_gain_variant | splice_region_variant | splice_acceptor_variant&intron_variant | downstream_gene_variant | stop_gained | stop_lost&splice_region_variant | upstream_gene_variant |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS2A02G362300.1 | 0 | 0 | 37 | 0 | 0 | 35 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6A02G120200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 0 | 0 | 29 | 0 | 0 | 21 |
TraesCS3A02G303800.1 | 1 | 0 | 8 | 0 | 0 | 3 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 27 |
TraesCS5A02G344000.1 | 1 | 0 | 42 | 1 | 0 | 38 | 0 | 15 | 0 | 0 | 0 | 0 | 1 | 0 | 8 |
TraesCS7A02G027800.1 | 0 | 0 | 12 | 0 | 0 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS6A02G161900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 0 | 0 | 44 |
TraesCS4A02G209700.1 | 0 | 0 | 2 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 45 | 0 | 0 | 3 |
TraesCS7A02G464600.1 | 2 | 0 | 6 | 0 | 0 | 16 | 5 | 2 | 1 | 0 | 0 | 22 | 1 | 0 | 35 |
TraesCS2A02G197000.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
TraesCS3A02G085200.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 |
TraesCS7A02G534600.1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 11 |
TraesCS3A02G095700.1 | 0 | 0 | 5 | 0 | 0 | 7 | 9 | 1 | 0 | 0 | 0 | 22 | 0 | 0 | 32 |
TraesCS7A02G561700.1 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 3 | 0 | 0 | 0 | 5 | 0 | 0 | 11 |
TraesCS5A02G481000.1 | 0 | 0 | 23 | 0 | 0 | 18 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 3 |
TraesCS3A02G086300.1 | 0 | 0 | 1 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 1 | 8 |
B
Download the VCF file:
download
Id | stop_lost&splice_region_variant | 5_prime_UTR_variant | missense_variant&splice_region_variant | splice_donor_variant&intron_variant | intron_variant | upstream_gene_variant | splice_region_variant&intron_variant | stop_lost | missense_variant | 5_prime_UTR_premature_start_codon_gain_variant | downstream_gene_variant | splice_region_variant&synonymous_variant | synonymou1 | synonymousTraesCS3B02G265500.1 | splice_acceptor_variant&intron_variant | 3_prime_UTR_variant | synonymous_variant | stop_gained | synonymousTraesCS3B02G323800.1 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TraesCS5B02G031600.1 | 0 | 0 | 0 | 0 | 4 | 52 | 0 | 0 | 6 | 2 | 6 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
TraesCS1B02G019000.1 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS5B02G182900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2B02G507000.1 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 3 | 0 | 9 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 |
TraesCS3B02G111400.1 | 0 | 0 | 0 | 0 | 12 | 4 | 0 | 0 | 2 | 0 | 30 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
TraesCS3B02G541100.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS2B02G471100.1 | 0 | 0 | 0 | 0 | 92 | 46 | 0 | 0 | 4 | 0 | 56 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
TraesCS6B02G073300.1 | 0 | 0 | 0 | 0 | 0 | 24 | 0 | 0 | 34 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 |
TraesCS2B02G562700.1 | 0 | 10 | 0 | 0 | 9 | 2 | 1 | 0 | 8 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 9 | 1 | 0 |
TraesCS2B02G593600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS3B02G569800.1 | 0 | 0 | 0 | 0 | 0 | 14 | 0 | 0 | 2 | 0 | 26 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
TraesCS6B02G468400.1 | 0 | 0 | 0 | 0 | 0 | 6 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS7B02G323800.1 | 0 | 2 | 0 | 0 | 2 | 14 | 0 | 0 | 0 | 2 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G397100.1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
TraesCS1B02G017500.1 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 4 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 32 | 0 | 0 |