TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | 3_prime_UTR_variant | stop_gained | splice_region_variant&intron_variant | 5_prime_UTR_variant | splice_acceptor_variant&intron_variant | splice_region_variant&synonymous_variant | intron_variant | downstream_gene_variant | splice_region_variant | missense_variant | stop_lost&splice_region_variant | splice_donor_variant&intron_variant | missense_variant&splice_region_variant | upstream_gene_variant | 5_prime_UTR_premature_start_codon_gain_variant | synonymous_variant | start_lost |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS3A02G245900.2 | 1 | 0 | 0 | 2 | 0 | 0 | 17 | 41 | 0 | 0 | 0 | 0 | 0 | 33 | 0 | 0 | 0 |
| TraesCS3A02G176500.2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G339600.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 17 | 0 | 2 | 0 | 0 | 0 | 54 | 0 | 2 | 0 |
| TraesCS7A02G357500.1 | 1 | 0 | 0 | 0 | 0 | 0 | 26 | 11 | 0 | 2 | 0 | 0 | 0 | 24 | 0 | 5 | 0 |
| TraesCS7A02G299600.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS7A02G208200.1 | 1 | 0 | 1 | 0 | 0 | 0 | 23 | 2 | 0 | 2 | 0 | 0 | 0 | 4 | 0 | 2 | 0 |
| TraesCS7A02G204300.1 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2A02G306800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 17 | 0 | 4 | 0 | 0 | 0 | 18 | 0 | 3 | 0 |
| TraesCS3A02G438900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 36 | 1 | 0 | 0 | 0 | 0 | 11 | 0 | 5 | 0 |
| TraesCS5A02G143100.1 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 7 | 0 | 0 | 0 | 26 | 0 | 5 | 0 |
| TraesCS6A02G057400.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12 | 0 | 0 | 0 |
| TraesCS4A02G131000.1 | 1 | 0 | 0 | 1 | 0 | 0 | 3 | 15 | 0 | 3 | 0 | 0 | 0 | 39 | 0 | 0 | 0 |
| TraesCS5A02G275900.1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 30 | 1 | 3 | 0 |
| TraesCS3A02G377700.2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 65 | 0 | 0 | 0 | 0 | 0 | 25 | 1 | 1 | 0 |
| TraesCS2A02G326600.1 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | 0 |
B
Download the VCF file:
download
| Id | missense_variant&splice_region_variant | downstream_gene_variant | intron_variant | splice_region_variant&intron_variant | splice_region_variant&synonymous_variant | synonymous_variant | upstream_gene_variant | 5_prime_UTR_variant | 3_prime_UTR_variant | missense_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5B02G141900.1 | 0 | 0 | 0 | 4 | 0 | 8 | 2 | 4 | 4 | 20 |
| TraesCS1B02G274300.1 | 0 | 28 | 2 | 0 | 0 | 2 | 8 | 0 | 0 | 0 |
| TraesCS7B02G233300.1 | 0 | 12 | 2 | 0 | 0 | 4 | 28 | 0 | 2 | 0 |
| TraesCS7B02G160900.1 | 0 | 62 | 2 | 0 | 0 | 0 | 4 | 0 | 0 | 0 |
| TraesCS2B02G484100.1 | 0 | 0 | 0 | 0 | 0 | 2 | 8 | 0 | 0 | 6 |
| TraesCS7B02G219400.1 | 0 | 54 | 4 | 0 | 0 | 2 | 38 | 0 | 2 | 2 |
| TraesCS3B02G184300.1 | 0 | 5 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 |
| TraesCS7B02G116400.1 | 0 | 4 | 0 | 0 | 0 | 0 | 15 | 0 | 0 | 1 |
| TraesCS4B02G328600.1 | 0 | 174 | 0 | 0 | 0 | 6 | 0 | 0 | 4 | 0 |
| TraesCS2B02G403300.1 | 0 | 12 | 22 | 0 | 0 | 0 | 24 | 0 | 0 | 0 |
| TraesCS4B02G098200.1 | 0 | 24 | 2 | 0 | 0 | 0 | 72 | 0 | 2 | 2 |
| TraesCS2B02G118200.1 | 0 | 38 | 0 | 0 | 0 | 0 | 34 | 0 | 0 | 0 |
| TraesCS3B02G194000.1 | 0 | 22 | 4 | 0 | 0 | 0 | 6 | 0 | 0 | 0 |
| TraesCS5B02G226800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 2 |
| TraesCS2B02G118500.1 | 0 | 22 | 2 | 0 | 0 | 0 | 14 | 0 | 0 | 0 |