TWGFD
The tetraploid wheat gene family database
A
Download the VCF file:
download
| Id | synonymous_variant | 3_prime_UTR_variant | missense_variant&splice_region_variant | downstream_gene_variant | upstream_gene_variant | splice_region_variant&intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | intron_variant | stop_gained | splice_region_variant&synonymous_variant | 5_prime_UTR_variant | missense_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS2A02G009600.1 | 33 | 8 | 2 | 26 | 18 | 5 | 0 | 100 | 0 | 0 | 0 | 37 |
| TraesCS7A02G380900.1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 2 |
| TraesCS2A02G009700.1 | 12 | 0 | 0 | 3 | 40 | 2 | 0 | 17 | 0 | 1 | 0 | 6 |
| TraesCS2A02G344300.1 | 24 | 2 | 0 | 0 | 68 | 4 | 3 | 22 | 0 | 1 | 18 | 2 |
| TraesCS7A02G119800.1 | 0 | 0 | 0 | 0 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5A02G392600.1 | 6 | 2 | 0 | 3 | 27 | 2 | 0 | 16 | 0 | 0 | 0 | 1 |
| TraesCS3A02G257500.1 | 15 | 6 | 0 | 5 | 35 | 1 | 0 | 33 | 0 | 0 | 1 | 3 |
| TraesCS5A02G392700.1 | 4 | 2 | 1 | 45 | 40 | 1 | 0 | 17 | 0 | 0 | 0 | 2 |
| TraesCS5A02G495900.1 | 20 | 5 | 0 | 57 | 18 | 2 | 0 | 127 | 0 | 1 | 1 | 22 |
| TraesCS3A02G536300.1 | 30 | 0 | 0 | 0 | 21 | 3 | 0 | 58 | 0 | 1 | 0 | 1 |
| TraesCS2A02G463900.1 | 12 | 0 | 1 | 0 | 17 | 2 | 0 | 39 | 0 | 0 | 3 | 4 |
| TraesCS1A02G081300.1 | 30 | 0 | 0 | 3 | 52 | 1 | 1 | 31 | 0 | 0 | 5 | 1 |
| TraesCS3A02G417100.1 | 12 | 0 | 0 | 64 | 14 | 7 | 1 | 0 | 0 | 0 | 1 | 2 |
| TraesCS1A02G310100.1 | 3 | 0 | 0 | 0 | 41 | 0 | 0 | 1 | 0 | 0 | 0 | 5 |
| TraesCS4A02G051100.1 | 36 | 6 | 0 | 10 | 0 | 2 | 0 | 7 | 0 | 0 | 0 | 10 |
B
Download the VCF file:
download
| Id | synonymous_variant | missense_variant | splice_donor_variant&intron_variant | splice_region_variant&intron_variant | missense_variant&splice_region_variant | splice_region_variant | downstream_gene_variant | 3_prime_UTR_variant | intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | upstream_gene_variant | 5_prime_UTR_variant | splice_region_variant&synonymous_variant |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS7B02G015400.1 | 4 | 2 | 0 | 0 | 2 | 0 | 44 | 4 | 18 | 0 | 26 | 0 | 0 |
| TraesCS3B02G290900.1 | 12 | 10 | 0 | 4 | 0 | 0 | 12 | 0 | 2 | 0 | 22 | 0 | 0 |
| TraesCS7B02G203400.1 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 28 | 0 | 0 |
| TraesCS6B02G291900.1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 2 | 0 |
| TraesCS5B02G397600.1 | 4 | 4 | 0 | 2 | 0 | 0 | 58 | 0 | 0 | 0 | 10 | 0 | 0 |
| TraesCS7B02G203300.1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G161900.1 | 0 | 0 | 0 | 0 | 0 | 0 | 16 | 2 | 2 | 0 | 4 | 0 | 0 |
| TraesCS6B02G170700.1 | 12 | 2 | 0 | 2 | 0 | 0 | 6 | 0 | 8 | 0 | 40 | 0 | 0 |
| TraesCS4B02G203000.1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 20 | 0 | 0 |
| TraesCS7B02G282800.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 4 | 0 | 88 | 0 | 0 |
| TraesCS2B02G012200.1 | 12 | 36 | 0 | 2 | 0 | 0 | 14 | 0 | 14 | 0 | 22 | 0 | 0 |
| TraesCS3B02G395000.1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G472800.1 | 36 | 16 | 0 | 2 | 0 | 0 | 4 | 6 | 12 | 0 | 0 | 0 | 0 |
| TraesCS3B02G136800.1 | 4 | 6 | 0 | 2 | 0 | 0 | 4 | 0 | 24 | 0 | 100 | 0 | 0 |
| TraesCS7B02G052900.1 | 4 | 12 | 0 | 0 | 0 | 2 | 2 | 8 | 16 | 0 | 44 | 0 | 2 |