TWGFD
The tetraploid wheat gene family database
A
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| Id | downstream_gene_variant | splice_acceptor_variant&intron_variant | upstream_gene_variant | splice_region_variant&synonymous_variant | splice_region_variant&intron_variant | intron_variant | 5_prime_UTR_variant | synonymous_variant | missense_variant | 3_prime_UTR_variant |
|---|---|---|---|---|---|---|---|---|---|---|
| TraesCS5A02G142700.1 | 30 | 0 | 51 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| TraesCS5A02G227100.1 | 29 | 0 | 56 | 0 | 0 | 7 | 1 | 2 | 1 | 0 |
| TraesCS5A02G227200.1 | 43 | 0 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4A02G264100.1 | 8 | 0 | 7 | 0 | 0 | 0 | 0 | 5 | 0 | 0 |
| TraesCS5A02G246500.1 | 32 | 0 | 59 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| TraesCS1A02G418600.1 | 107 | 1 | 1 | 1 | 1 | 3 | 0 | 4 | 4 | 0 |
| TraesCS3A02G226100.1 | 88 | 0 | 41 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| TraesCS4A02G226800.1 | 32 | 0 | 27 | 0 | 0 | 0 | 0 | 1 | 2 | 0 |
| TraesCS2A02G305400.1 | 8 | 0 | 5 | 0 | 0 | 0 | 0 | 3 | 0 | 0 |
B
Download the VCF file:
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| Id | upstream_gene_variant | downstream_gene_variant | synonymous_variant | 3_prime_UTR_variant | intron_variant | 5_prime_UTR_premature_start_codon_gain_variant | missense_variant | 5_prime_UTR_variant |
|---|---|---|---|---|---|---|---|---|
| TraesCS3B02G484100.1 | 1 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS3B02G258400.1 | 24 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| TraesCS4B02G050800.1 | 7 | 26 | 0 | 0 | 0 | 0 | 1 | 0 |
| TraesCS5B02G225700.1 | 35 | 24 | 1 | 3 | 36 | 2 | 0 | 2 |
| TraesCS5B02G243800.1 | 11 | 17 | 1 | 2 | 0 | 0 | 0 | 0 |
| TraesCS4B02G089700.1 | 10 | 23 | 0 | 0 | 0 | 0 | 1 | 0 |
| TraesCS5B02G226000.1 | 8 | 12 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS2B02G322200.1 | 9 | 10 | 2 | 0 | 0 | 0 | 0 | 0 |
| TraesCS5B02G141400.1 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| TraesCS1B02G448600.1 | 37 | 0 | 4 | 0 | 0 | 0 | 6 | 0 |